STRINGSTRING
A0A1D6EBQ1 A0A1D6EBQ1 TIDP3731 TIDP3731 A0A1D6GUS1 A0A1D6GUS1 A0A1D6H722 A0A1D6H722 A0A1D6I0C5 A0A1D6I0C5 Pco121831(436) Pco121831(436) A0A1D6L4A5 A0A1D6L4A5 A0A1D6LNS1 A0A1D6LNS1 A0A1D6MI05 A0A1D6MI05 A0A1D6N312 A0A1D6N312 A0A1D6P2G5 A0A1D6P2G5 A0A1D6Q029 A0A1D6Q029 B6T7N2_MAIZE B6T7N2_MAIZE HDT1 HDT1 HDA19_MAIZE HDA19_MAIZE HIRA_MAIZE HIRA_MAIZE DMT105 DMT105 FIE2 FIE2 FIE1 FIE1 hda101 hda101 ZMET5 ZMET5 MET2A MET2A HDT3 HDT3 HDT2 HDT2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A1D6EBQ1Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (447 aa)
TIDP3731Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (119 aa)
A0A1D6GUS1E3 ubiquitin protein ligase. (860 aa)
A0A1D6H722Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (408 aa)
A0A1D6I0C5Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (969 aa)
Pco121831(436)E3 ubiquitin protein ligase. (895 aa)
A0A1D6L4A5PHD finger protein ING. (283 aa)
A0A1D6LNS1E3 ubiquitin protein ligase. (871 aa)
A0A1D6MI05Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (969 aa)
A0A1D6N312Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (139 aa)
A0A1D6P2G5Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (531 aa)
A0A1D6Q029Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (491 aa)
B6T7N2_MAIZEPHD finger protein ING. (249 aa)
HDT1Histone deacetylase HDT1; Mediates the deacetylation of lysine residues on the N- terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Able to deacetylate all 4 core histones; Belongs to the histone deacetylase HD2 family. (307 aa)
HDA19_MAIZEProbable histone deacetylase 19; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes (By similarity). (513 aa)
HIRA_MAIZEProtein HIRA; Histone chaperone involved in maintining knox genes silencing throughout leaf development. (964 aa)
DMT105DNA (cytosine-5)-methyltransferase 3; May be involved in the CpXpG methylation and in gene silencing. (915 aa)
FIE2Polycomb group protein FIE2; Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They probably act via the methylation of histones, rendering chromatin heritably changed in its expressibility (By similarity). (379 aa)
FIE1Polycomb group protein FIE1; Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They probably act via the methylation of histones, rendering chromatin heritably changed in its expressibility (By similarity); Belongs to the WD repeat ESC family. (461 aa)
hda101Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (517 aa)
ZMET5DNA (cytosine-5)-methyltransferase 2; May be involved in the CpXpG methylation and in gene silencing. (915 aa)
MET2ADNA (cytosine-5)-methyltransferase 1; Involved in the CpXpG methylation and in gene silencing. (912 aa)
HDT3Histone deacetylase HDT3; Mediates the deacetylation of lysine residues on the N- terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (By similarity). (300 aa)
HDT2Histone deacetylase HDT2; Mediates the deacetylation of lysine residues on the N- terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (By similarity). (303 aa)
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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