STRINGSTRING
A0A1D6DT30 A0A1D6DT30 A0A1D6E2I0 A0A1D6E2I0 A0A1D6ELS0 A0A1D6ELS0 A0A1D6EMG7 A0A1D6EMG7 A0A1D6F342 A0A1D6F342 A0A1D6GHY0 A0A1D6GHY0 A0A1D6GMS0 A0A1D6GMS0 A0A1D6GUA9 A0A1D6GUA9 A0A1D6GUL6 A0A1D6GUL6 A0A1D6HRK1 A0A1D6HRK1 A0A1D6HRK3 A0A1D6HRK3 A0A1D6HYF9 A0A1D6HYF9 A0A1D6HZ79 A0A1D6HZ79 A0A1D6ILF7 A0A1D6ILF7 A0A1D6IU95 A0A1D6IU95 A0A1D6J231 A0A1D6J231 A0A1D6JMK1 A0A1D6JMK1 A0A1D6K232 A0A1D6K232 A0A1D6K334 A0A1D6K334 A0A1D6K7I2 A0A1D6K7I2 A0A1D6KGG6 A0A1D6KGG6 A0A1D6KJQ1 A0A1D6KJQ1 A0A1D6KLG3 A0A1D6KLG3 A0A1D6KRW8 A0A1D6KRW8 A0A1D6L1V3 A0A1D6L1V3 A0A1D6LBU5 A0A1D6LBU5 A0A1D6LKX1 A0A1D6LKX1 A0A1D6MVR7 A0A1D6MVR7 A0A1D6NF15 A0A1D6NF15 A0A1D6NUA7 A0A1D6NUA7 Si605018e07b Si605018e07b A0A1D6PBW4 A0A1D6PBW4 A0A1D6PKZ8 A0A1D6PKZ8 A0A1D6PQB0 A0A1D6PQB0 Si486017b03 Si486017b03 A0A1D6PW72 A0A1D6PW72 A0A1D6PX40 A0A1D6PX40 A0A1D6Q1Y8 A0A1D6Q1Y8 A0A1Q0ZAV5 A0A1Q0ZAV5 Si946076e12 Si946076e12 B4FCM8_MAIZE B4FCM8_MAIZE B4FGM1_MAIZE B4FGM1_MAIZE B4FLZ6_MAIZE B4FLZ6_MAIZE Pco144871 Pco144871 Pco088367b Pco088367b Umc1268 Umc1268 Trh1 Trh1 B4FZQ6_MAIZE B4FZQ6_MAIZE B4G0C7_MAIZE B4G0C7_MAIZE B6SI57_MAIZE B6SI57_MAIZE B6SIF9_MAIZE B6SIF9_MAIZE B6SJZ5_MAIZE B6SJZ5_MAIZE B6SX64_MAIZE B6SX64_MAIZE B6T1G5_MAIZE B6T1G5_MAIZE B6UCY0_MAIZE B6UCY0_MAIZE B8A0V9_MAIZE B8A0V9_MAIZE C0P301_MAIZE C0P301_MAIZE Pco103361 Pco103361 K7TNL9_MAIZE K7TNL9_MAIZE K7URD5_MAIZE K7URD5_MAIZE H2B1_MAIZE H2B1_MAIZE His2b2 His2b2 H2B4_MAIZE H2B4_MAIZE TBP1 TBP1 TBP2 TBP2 His2b5 His2b5 H2B3_MAIZE H2B3_MAIZE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A1D6DT30RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (451 aa)
A0A1D6E2I0DNA binding protein. (240 aa)
A0A1D6ELS0Histone H2B; Belongs to the histone H2B family. (262 aa)
A0A1D6EMG7DNA-directed RNA polymerases II IV and V subunit 12. (69 aa)
A0A1D6F342Histone H2B; Belongs to the histone H2B family. (152 aa)
A0A1D6GHY0CDK-activating kinase assembly factor MAT1 family protein. (223 aa)
A0A1D6GMS0TATA-box-binding protein 2. (156 aa)
A0A1D6GUA9RNA polymerase I specific transcription initiation factor RRN3 protein. (660 aa)
A0A1D6GUL6DNA-directed RNA polymerases II IV and V subunit 8B. (129 aa)
A0A1D6HRK1Uncharacterized protein. (472 aa)
A0A1D6HRK3Uncharacterized protein. (475 aa)
A0A1D6HYF9DNA-directed RNA polymerases I, II, and III 7.3 kDa polypeptide. (52 aa)
A0A1D6HZ79TATA-box-binding protein 2. (302 aa)
A0A1D6ILF7Uncharacterized protein. (235 aa)
A0A1D6IU95DNA-directed RNA polymerases II IV and V subunit 10. (170 aa)
A0A1D6J231DNA repair helicase UVH6. (824 aa)
A0A1D6JMK1TATA-box-binding protein 2. (144 aa)
A0A1D6K232DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1690 aa)
A0A1D6K334DNA binding protein. (240 aa)
A0A1D6K7I2TATA-box-binding protein 2. (106 aa)
A0A1D6KGG6RNA polymerase II transcription factor B subunit 5. (87 aa)
A0A1D6KJQ1DNA binding protein. (385 aa)
A0A1D6KLG3DNA binding protein. (240 aa)
A0A1D6KRW8DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1147 aa)
A0A1D6L1V3DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (115 aa)
A0A1D6LBU5DNA binding protein. (793 aa)
A0A1D6LKX1RNA polymerase I specific transcription initiation factor RRN3 protein. (241 aa)
A0A1D6MVR7RNA polymerase I specific transcription initiation factor RRN3 protein. (197 aa)
A0A1D6NF15DNA repair helicase XPB1. (767 aa)
A0A1D6NUA7CDK-activating kinase assembly factor MAT1 family protein. (202 aa)
Si605018e07bWAT1-related protein. (362 aa)
A0A1D6PBW4DNA binding protein. (130 aa)
A0A1D6PKZ8Histone H2B; Belongs to the histone H2B family. (238 aa)
A0A1D6PQB0DNA binding. (503 aa)
Si486017b03Putative MYB DNA-binding domain superfamily protein. (621 aa)
A0A1D6PW72Putative RNA polymerase II transcription factor B subunit 1-1. (610 aa)
A0A1D6PX40Uncharacterized protein. (102 aa)
A0A1D6Q1Y8Uncharacterized protein. (86 aa)
A0A1Q0ZAV5DNA binding protein. (671 aa)
Si946076e12RNA polymerase I subunit 43. (372 aa)
B4FCM8_MAIZEHistone H2B; Belongs to the histone H2B family. (150 aa)
B4FGM1_MAIZEDNA-directed RNA polymerases II and IV subunit 5A. (206 aa)
B4FLZ6_MAIZEDNA-directed RNA polymerases II IV and V subunit 6A. (142 aa)
Pco144871DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide; Belongs to the eukaryotic RPB8 RNA polymerase subunit family. (146 aa)
Pco088367bDNA-directed RNA polymerases II 24 kDa polypeptide. (210 aa)
Umc1268Histone H2B; Belongs to the histone H2B family. (137 aa)
Trh1Histone H2B; Belongs to the histone H2B family. (148 aa)
B4FZQ6_MAIZEHistone H2B; Belongs to the histone H2B family. (152 aa)
B4G0C7_MAIZEGeneral transcription factor IIH subunit. (428 aa)
B6SI57_MAIZEDNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide. (142 aa)
B6SIF9_MAIZEHistone H2B; Belongs to the histone H2B family. (150 aa)
B6SJZ5_MAIZEHistone H2B; Belongs to the histone H2B family. (150 aa)
B6SX64_MAIZEREX1 DNA Repair family protein. (70 aa)
B6T1G5_MAIZEHistone H2B; Belongs to the histone H2B family. (149 aa)
B6UCY0_MAIZESANTA domain-containing protein. (491 aa)
B8A0V9_MAIZEDNA-directed RNA polymerases. (257 aa)
C0P301_MAIZERNA polymerase II transcription factor B subunit 4. (294 aa)
Pco103361Cyclin-H1-1; Belongs to the cyclin family. (329 aa)
K7TNL9_MAIZEUncharacterized protein. (254 aa)
K7URD5_MAIZEDNA-directed RNA polymerases II IV and V subunit 12. (45 aa)
H2B1_MAIZEHistone H2B.1; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (151 aa)
His2b2Histone H2B.2; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (150 aa)
H2B4_MAIZEHistone H2B.4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (137 aa)
TBP1TATA-box-binding protein 1; General transcription factor that functions at the core of the DNA-binding multiprotein factor TFIID. Binding of TFIID to the TATA box is the initial transcriptional step of the pre-initiation complex (PIC), playing a role in the activation of eukaryotic genes transcribed by RNA polymerase II. (200 aa)
TBP2TATA-box-binding protein 2; General transcription factor that functions at the core of the DNA-binding multiprotein factor TFIID. Binding of TFIID to the TATA box is the initial transcriptional step of the pre-initiation complex (PIC), playing a role in the activation of eukaryotic genes transcribed by RNA polymerase II. (200 aa)
His2b5Histone H2B.5; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (154 aa)
H2B3_MAIZEHistone H2B.3; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (153 aa)
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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