STRINGSTRING
Hda110 Hda110 A0A1D6GAU2 A0A1D6GAU2 A0A1D6GLQ7 A0A1D6GLQ7 A0A1D6IAU4 A0A1D6IAU4 SnRK2.2 SnRK2.2 A0A1D6IXA3 A0A1D6IXA3 CBL1 CBL1 A0A1D6L242 A0A1D6L242 A0A1D6MXX1 A0A1D6MXX1 B4FIS0_MAIZE B4FIS0_MAIZE B4FIV4_MAIZE B4FIV4_MAIZE B6SWB1_MAIZE B6SWB1_MAIZE B6UI01_MAIZE B6UI01_MAIZE MYB61 MYB61 K7TRC0_MAIZE K7TRC0_MAIZE H4C7 H4C7 CDPK CDPK
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Hda110Histone deacetylase. (619 aa)
A0A1D6GAU2Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (122 aa)
A0A1D6GLQ7Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (114 aa)
A0A1D6IAU4Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (137 aa)
SnRK2.2Serine/threonine-protein kinase SRK2C; Belongs to the protein kinase superfamily. (345 aa)
A0A1D6IXA3Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (293 aa)
CBL1Calcineurin B-like1. (213 aa)
A0A1D6L242Glutamate receptor 3.3; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (631 aa)
A0A1D6MXX1UBP-type domain-containing protein. (193 aa)
B4FIS0_MAIZEPyrabactin resistance-like protein. (200 aa)
B4FIV4_MAIZESerine/threonine-protein kinase SRK2C; Belongs to the protein kinase superfamily. (333 aa)
B6SWB1_MAIZEProtein kinase superfamily protein. (396 aa)
B6UI01_MAIZEABA response element binding factor. (412 aa)
MYB61MYB transcription factor. (289 aa)
K7TRC0_MAIZEPutative MYB DNA-binding domain superfamily protein. (406 aa)
H4C7Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
CDPKCalcium-dependent protein kinase ZmCPK11. (510 aa)
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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