STRINGSTRING
A0A1D6Q029 A0A1D6Q029 SnrK1 SnrK1 hda101 hda101 A0A1D6EBQ1 A0A1D6EBQ1 Rpd3 Rpd3 A0A1D6H722 A0A1D6H722 Hda110 Hda110 A0A1D6P2G5 A0A1D6P2G5 rbcL rbcL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A1D6Q029Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (491 aa)
SnrK1Non-specific serine/threonine protein kinase. (509 aa)
hda101Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (517 aa)
A0A1D6EBQ1Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (447 aa)
Rpd3Histone deacetylase. (704 aa)
A0A1D6H722Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (408 aa)
Hda110Histone deacetylase. (619 aa)
A0A1D6P2G5Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (531 aa)
rbcLRibulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. (476 aa)
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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