Your Input: | |
| | Shal_0059 | PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sde:Sde_0081 putative methyl-accepting chemotaxis sensory transducer. (552 aa) |
| | Shal_0096 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (133 aa) |
| | Shal_0912 | PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: slo:Shew_0876 methyl-accepting chemotaxis sensory transducer. (673 aa) |
| | Shal_0952 | PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: slo:Shew_0922 methyl-accepting chemotaxis sensory transducer. (573 aa) |
| | Shal_1295 | PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: vco:VC0395_A1249 methyl-accepting chemotaxis protein. (546 aa) |
| | Shal_1374 | PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ppr:PBPRB0365 hypothetical methyl-accepting chemotaxis protein. (541 aa) |
| | Shal_1385 | PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: slo:Shew_1310 methyl-accepting chemotaxis sensory transducer. (667 aa) |
| | Shal_1422 | PFAM: FlgN family protein; KEGG: slo:Shew_1340 FlgN family protein. (141 aa) |
| | Shal_1423 | PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: sbm:Shew185_2966 anti-sigma-28 factor, FlgM. (104 aa) |
| | Shal_1424 | PFAM: SAF domain protein; KEGG: slo:Shew_1342 SAF domain protein. (257 aa) |
| | Shal_1425 | PFAM: response regulator receiver; CheW domain protein; KEGG: sfr:Sfri_1159 response regulator receiver modulated CheW protein. (306 aa) |
| | Shal_1426 | PFAM: MCP methyltransferase CheR-type; KEGG: shm:Shewmr7_1328 MCP methyltransferase, CheR-type. (277 aa) |
| | Shal_1427 | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (132 aa) |
| | Shal_1428 | TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: sbl:Sbal_2946 flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. (138 aa) |
| | Shal_1429 | Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein. (267 aa) |
| | Shal_1430 | PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: slo:Shew_1348 flagellar basal body FlaE domain protein. (453 aa) |
| | Shal_1431 | TIGRFAM: flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: slo:Shew_1349 flagellar basal-body rod protein FlgF; Belongs to the flagella basal body rod proteins family. (247 aa) |
| | Shal_1432 | TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: slo:Shew_1350 flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family. (262 aa) |
| | flgH | Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (224 aa) |
| | flgI | Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (364 aa) |
| | Shal_1435 | KEGG: slo:Shew_1353 flagellar rod assembly protein/muramidase FlgJ; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2. (368 aa) |
| | Shal_1436 | TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: slo:Shew_1354 flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family. (639 aa) |
| | Shal_1437 | TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: slo:Shew_1355 flagellar hook-associated protein 3. (396 aa) |
| | Shal_1438 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (273 aa) |
| | Shal_1439 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (272 aa) |
| | Shal_1440 | PFAM: flagellar protein FlaG protein; KEGG: slo:Shew_1358 flagellar protein FlaG protein. (128 aa) |
| | Shal_1441 | Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (454 aa) |
| | Shal_1443 | PFAM: flagellar protein FliS; KEGG: slo:Shew_1361 flagellar protein FliS. (136 aa) |
| | Shal_1445 | PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; KEGG: sbm:Shew185_2939 PAS/PAC sensor signal transduction histidine kinase. (374 aa) |
| | Shal_1446 | Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: sfr:Sfri_1180 two component, sigma54 specific, transcriptional regulator, fis family protein. (450 aa) |
| | fliE | TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: sbl:Sbal_2927 flagellar hook-basal body complex subunit FliE. (110 aa) |
| | Shal_1448 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (566 aa) |
| | Shal_1449 | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (348 aa) |
| | Shal_1450 | PFAM: flagellar assembly protein FliH; KEGG: shn:Shewana3_1344 flagellar assembly protein FliH. (327 aa) |
| | Shal_1451 | KEGG: slo:Shew_1369 flagellar protein export ATPase FliI; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase. (446 aa) |
| | Shal_1452 | TIGRFAM: flagellar export protein FliJ; KEGG: son:SO_3224 flagellar protein FliJ. (148 aa) |
| | Shal_1453 | PFAM: flagellar hook-length control protein; KEGG: slo:Shew_1371 flagellar hook-length control protein. (503 aa) |
| | Shal_1454 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (172 aa) |
| | Shal_1455 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (342 aa) |
| | Shal_1456 | Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (125 aa) |
| | Shal_1457 | PFAM: flagellar biosynthesis protein FliO; KEGG: slo:Shew_1375 flagellar biosynthesis protein, FliO. (123 aa) |
| | fliP | Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (249 aa) |
| | Shal_1459 | TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: slo:Shew_1377 flagellar biosynthetic protein FliQ. (89 aa) |
| | Shal_1460 | Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (265 aa) |
| | flhB | Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (377 aa) |
| | flhA | Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (699 aa) |
| | Shal_1463 | PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; KEGG: slo:Shew_1381 GTP-binding signal recognition particle SRP54, G-domain. (470 aa) |
| | Shal_1464 | PFAM: Cobyrinic acid ac-diamide synthase; KEGG: slo:Shew_1382 cobyrinic acid a,c-diamide synthase. (299 aa) |
| | fliA | RNA polymerase, sigma 28 subunit, FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. (239 aa) |
| | Shal_1466 | PFAM: response regulator receiver; KEGG: slo:Shew_1384 response regulator receiver protein. (127 aa) |
| | Shal_1467 | Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). (245 aa) |
| | Shal_1468 | CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: slo:Shew_1386 CheA signal transduction histidine kinase. (767 aa) |
| | cheB | Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (396 aa) |
| | Shal_1472 | PFAM: CheW domain protein; KEGG: slo:Shew_1390 CheW protein. (313 aa) |
| | Shal_1473 | PFAM: CheW domain protein; KEGG: slo:Shew_1391 CheW protein. (163 aa) |
| | Shal_1546 | PFAM: response regulator receiver; CheW domain protein; KEGG: slo:Shew_1457 response regulator receiver modulated CheW protein. (300 aa) |
| | Shal_1811 | PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: slo:Shew_2217 methyl-accepting chemotaxis sensory transducer. (498 aa) |
| | Shal_2230 | PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Nitrate and nitrite sensing domain protein; KEGG: sbm:Shew185_1950 methyl-accepting chemotaxis sensory transducer. (664 aa) |
| | Shal_2304 | PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: slo:Shew_1868 methyl-accepting chemotaxis sensory transducer. (546 aa) |
| | Shal_2398 | PFAM: response regulator receiver; CheW domain protein; KEGG: shn:Shewana3_2462 response regulator receiver modulated CheW protein. (314 aa) |
| | Shal_2625 | PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: slo:Shew_2263 methyl-accepting chemotaxis sensory transducer. (484 aa) |
| | Shal_2632 | PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: sbl:Sbal_0193 methyl-accepting chemotaxis sensory transducer. (623 aa) |
| | Shal_3076 | PFAM: OmpA/MotB domain protein; KEGG: slo:Shew_2767 OmpA/MotB domain protein. (322 aa) |
| | Shal_3077 | PFAM: MotA/TolQ/ExbB proton channel; KEGG: slo:Shew_2768 MotA/TolQ/ExbB proton channel. (255 aa) |
| | Shal_3251 | PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: spc:Sputcn32_0796 methyl-accepting chemotaxis sensory transducer. (620 aa) |
| | Shal_3367 | PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: aha:AHA_2229 methyl-accepting chemotaxis protein. (484 aa) |
| | Shal_3586 | PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: ppr:PBPRA3375 putative methyl-accepting chemotaxis protein. (626 aa) |
| | Shal_3587 | PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ppr:PBPRA3375 putative methyl-accepting chemotaxis protein. (630 aa) |
| | Shal_3795 | CheC, inhibitor of MCP methylation; PFAM: response regulator receiver; KEGG: slo:Shew_0453 response regulator receiver protein. (331 aa) |
| | Shal_3953 | TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: vpa:VPA0596 putative methyl-accepting chemotaxis protein. (517 aa) |
| | Shal_4016 | PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sbm:Shew185_2544 methyl-accepting chemotaxis sensory transducer. (633 aa) |
| | flhA-2 | Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (693 aa) |
| | flhB-2 | Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (377 aa) |
| | Shal_4231 | Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (232 aa) |
| | Shal_4232 | PFAM: export protein FliQ family 3; KEGG: sbl:Sbal_3985 export protein FliQ, family 3. (89 aa) |
| | fliP-2 | Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (242 aa) |
| | Shal_4234 | Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (118 aa) |
| | Shal_4235 | KEGG: sbl:Sbal_3982 hypothetical protein. (293 aa) |
| | Shal_4236 | PFAM: OmpA/MotB domain protein; KEGG: vha:VIBHAR_04970 hypothetical protein. (304 aa) |
| | Shal_4237 | Sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: shw:Sputw3181_0461 sigma54 specific transcriptional regulator, fis family. (435 aa) |
| | fliE-2 | TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: sbl:Sbal_3980 flagellar hook-basal body complex subunit FliE. (112 aa) |
| | Shal_4239 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (572 aa) |
| | Shal_4240 | PFAM: flagellar motor switch protein FliG; KEGG: sbl:Sbal_3978 flagellar motor switch protein FliG. (328 aa) |
| | Shal_4241 | PFAM: flagellar assembly protein FliH; KEGG: sbl:Sbal_3977 flagellar assembly protein FliH. (250 aa) |
| | Shal_4242 | KEGG: sbl:Sbal_3976 ATPase, FliI/YscN family; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase. (446 aa) |
| | Shal_4244 | KEGG: shw:Sputw3181_0468 hypothetical protein. (152 aa) |
| | Shal_4245 | KEGG: shw:Sputw3181_0469 hypothetical protein. (95 aa) |
| | Shal_4246 | SAF domain; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. (248 aa) |
| | Shal_4247 | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (116 aa) |
| | Shal_4248 | TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; KEGG: sdn:Sden_3650 flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. (139 aa) |
| | Shal_4249 | Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein. (220 aa) |
| | Shal_4250 | PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: sdn:Sden_3648 flagellar basal body FlaE. (402 aa) |
| | Shal_4251 | TIGRFAM: flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein; KEGG: sbl:Sbal_3967 flagellar basal-body rod protein FlgF. (244 aa) |
| | Shal_4252 | TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: shw:Sputw3181_0476 flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family. (261 aa) |
| | flgH-2 | Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (224 aa) |
| | flgI-2 | Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (376 aa) |
| | Shal_4255 | KEGG: sdn:Sden_3643 hypothetical protein. (137 aa) |
| | flgK | TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: sbl:Sbal_3962 flagellar hook-associated protein FlgK. (457 aa) |
| | Shal_4257 | TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: spc:Sputcn32_3458 flagellar hook-associated protein 3. (305 aa) |
| | Shal_4260 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (271 aa) |
| | Shal_4261 | Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (462 aa) |
| | Shal_4262 | PFAM: flagellar protein FliS; KEGG: shw:Sputw3181_0486 flagellar protein FliS. (126 aa) |
| | Shal_4263 | KEGG: sbl:Sbal_3953 hypothetical protein. (108 aa) |
| | Shal_4264 | PFAM: flagellar hook-length control protein; KEGG: sbl:Sbal_3952 flagellar hook-length control protein. (377 aa) |
| | Shal_4265 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (151 aa) |
| | Shal_4266 | TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma-70; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: sdn:Sden_3633 RNA polymerase sigma factor, FliA/WhiG. (240 aa) |
| | Shal_4267 | PFAM: MotA/TolQ/ExbB proton channel; KEGG: sdn:Sden_3632 MotA/TolQ/ExbB proton channel. (285 aa) |
| | Shal_4268 | PFAM: OmpA/MotB domain protein; KEGG: sdn:Sden_3631 OmpA/MotB. (336 aa) |
