STRINGSTRING
Shal_0369 Shal_0369 Shal_0366 Shal_0366 Shal_2654 Shal_2654 Shal_3010 Shal_3010 Shal_1779 Shal_1779 Shal_3008 Shal_3008
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Shal_0369PFAM: Beta-ketoacyl synthase; KEGG: sbl:Sbal_0330 beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (432 aa)
Shal_0366PFAM: Beta-ketoacyl synthase; KEGG: slo:Shew_3526 beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (415 aa)
Shal_2654PFAM: Beta-ketoacyl synthase; KEGG: slo:Shew_2410 beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (424 aa)
Shal_3010PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; Beta-ketoacyl synthase; KEGG: slo:Shew_2667 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (1959 aa)
Shal_1779Beta-ketoacyl synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (412 aa)
Shal_3008KEGG: slo:Shew_2665 beta-ketoacyl synthase; TIGRFAM: Polyketide-type polyunsaturated fatty acid synthase, PfaA; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase. (2765 aa)
Your Current Organism:
Shewanella halifaxensis
NCBI taxonomy Id: 458817
Other names: S. halifaxensis HAW-EB4, Shewanella halifaxensis HAW-EB4, Shewanella halifaxensis str. HAW-EB4, Shewanella halifaxensis strain HAW-EB4
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