STRINGSTRING
ACMD2_02951 ACMD2_02951 ACMD2_05863 ACMD2_05863 ACMD2_18442 ACMD2_18442 ACMD2_26466 ACMD2_26466 ACMD2_04979 ACMD2_04979 ACMD2_25063 ACMD2_25063 ACMD2_12580 ACMD2_12580 ACMD2_26065 ACMD2_26065 ACMD2_10424 ACMD2_10424 ACMD2_27201 ACMD2_27201 ACMD2_22875 ACMD2_22875 ACMD2_06720 ACMD2_06720 ACMD2_08884 ACMD2_08884 ACMD2_21474 ACMD2_21474 ACMD2_03300 ACMD2_03300 ACMD2_21328 ACMD2_21328 ACMD2_21063 ACMD2_21063 ACMD2_21064 ACMD2_21064 ACMD2_22971 ACMD2_22971 ACMD2_18157 ACMD2_18157 ACMD2_11143 ACMD2_11143 ACMD2_03929 ACMD2_03929 ACMD2_17362 ACMD2_17362 ACMD2_08232 ACMD2_08232 ACMD2_25459 ACMD2_25459 ACMD2_26831 ACMD2_26831 ACMD2_20904 ACMD2_20904 ACMD2_25029 ACMD2_25029 ACMD2_02827 ACMD2_02827 ACMD2_05465 ACMD2_05465 ACMD2_21177 ACMD2_21177 ACMD2_10169 ACMD2_10169 ACMD2_18117 ACMD2_18117 ACMD2_16942 ACMD2_16942 ACMD2_05677 ACMD2_05677 ACMD2_05678 ACMD2_05678 ACMD2_15483 ACMD2_15483 ACMD2_09958 ACMD2_09958 ACMD2_15500 ACMD2_15500 ACMD2_18891 ACMD2_18891 ACMD2_09990 ACMD2_09990 ACMD2_11071 ACMD2_11071 ACMD2_19575 ACMD2_19575 ACMD2_24335 ACMD2_24335 ACMD2_11070 ACMD2_11070 ACMD2_08692 ACMD2_08692 ACMD2_22768 ACMD2_22768 ACMD2_24658 ACMD2_24658 ACMD2_27100 ACMD2_27100 ACMD2_14115 ACMD2_14115 ACMD2_06824 ACMD2_06824 ACMD2_22393 ACMD2_22393 ACMD2_00659 ACMD2_00659 ACMD2_18469 ACMD2_18469 ACMD2_27139 ACMD2_27139 ACMD2_26912 ACMD2_26912 ACMD2_25776 ACMD2_25776 ACMD2_22523 ACMD2_22523 ACMD2_08064 ACMD2_08064 ACMD2_24188 ACMD2_24188 ACMD2_08059 ACMD2_08059 ACMD2_21417 ACMD2_21417 ACMD2_26467 ACMD2_26467 ACMD2_19665 ACMD2_19665 ACMD2_19280 ACMD2_19280 ACMD2_17018 ACMD2_17018 ACMD2_07451 ACMD2_07451 ACMD2_01734 ACMD2_01734 ACMD2_17751 ACMD2_17751 ACMD2_23419 ACMD2_23419 ACMD2_07276 ACMD2_07276 ACMD2_15189 ACMD2_15189 ACMD2_16250 ACMD2_16250 ACMD2_02219 ACMD2_02219 ACMD2_08436 ACMD2_08436 ACMD2_13124 ACMD2_13124 ACMD2_05981 ACMD2_05981 ACMD2_14652 ACMD2_14652 ACMD2_09508 ACMD2_09508 ACMD2_23532 ACMD2_23532 ACMD2_23531 ACMD2_23531 ACMD2_24611 ACMD2_24611 ACMD2_17474 ACMD2_17474 ACMD2_24563 ACMD2_24563 ACMD2_14138 ACMD2_14138 ACMD2_17247 ACMD2_17247 ACMD2_13673 ACMD2_13673 ACMD2_24581 ACMD2_24581 ACMD2_12909 ACMD2_12909 ACMD2_23582 ACMD2_23582 ACMD2_02955 ACMD2_02955 ACMD2_16046 ACMD2_16046 ACMD2_21471 ACMD2_21471 ACMD2_21472 ACMD2_21472 ACMD2_21470 ACMD2_21470 ACMD2_03854 ACMD2_03854 ACMD2_09818 ACMD2_09818 ACMD2_07861 ACMD2_07861 ACMD2_22940 ACMD2_22940 ACMD2_16919 ACMD2_16919 ACMD2_22938 ACMD2_22938 ACMD2_22937 ACMD2_22937 ACMD2_19268 ACMD2_19268 ACMD2_04396 ACMD2_04396 ACMD2_03665 ACMD2_03665 ACMD2_11906 ACMD2_11906 ACMD2_24261 ACMD2_24261 ACMD2_05136 ACMD2_05136 ACMD2_03027 ACMD2_03027 ACMD2_05134 ACMD2_05134 ACMD2_11091 ACMD2_11091 ACMD2_00917 ACMD2_00917
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACMD2_02951RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (434 aa)
ACMD2_05863DNA repair protein RAD4. (930 aa)
ACMD2_18442DNA polymerase epsilon subunit 2. (212 aa)
ACMD2_26466NAC domain-containing protein 14. (370 aa)
ACMD2_04979Protein CHROMATIN REMODELING 8. (1225 aa)
ACMD2_25063Serine/threonine-protein kinase ULK3. (285 aa)
ACMD2_12580General transcription factor IIH subunit 3. (232 aa)
ACMD2_26065Uncharacterized protein. (73 aa)
ACMD2_10424Replication factor C subunit 1. (971 aa)
ACMD2_27201Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (848 aa)
ACMD2_22875Protein ALWAYS EARLY 3. (807 aa)
ACMD2_06720DNA repair helicase UVH6. (757 aa)
ACMD2_08884RING-box protein 1a. (196 aa)
ACMD2_21474Helicase and polymerase-containing protein TEBICHI. (1657 aa)
ACMD2_03300Putative ubiquitin receptor RAD23. (431 aa)
ACMD2_21328DNA repair helicase UVH6. (648 aa)
ACMD2_21063Uncharacterized protein. (105 aa)
ACMD2_21064DNA damage-binding protein CMR1. (243 aa)
ACMD2_22971Uncharacterized protein. (102 aa)
ACMD2_18157Protein STICHEL-like 2. (877 aa)
ACMD2_11143Citrate synthase 2, peroxisomal. (187 aa)
ACMD2_03929DNA polymerase I A, chloroplastic. (977 aa)
ACMD2_17362Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family. (521 aa)
ACMD2_08232Uncharacterized protein. (137 aa)
ACMD2_25459ATP-dependent RNA helicase CHL1. (182 aa)
ACMD2_26831Cyclin-dependent kinase D-1. (164 aa)
ACMD2_20904DNA polymerase delta small subunit. (422 aa)
ACMD2_25029NAC domain-containing protein 14. (655 aa)
ACMD2_02827Protein downstream neighbor of Son. (685 aa)
ACMD2_05465Rep_fac-A_C domain-containing protein. (343 aa)
ACMD2_21177Peptidyl-prolyl cis-trans isomerase CYP18-1. (44 aa)
ACMD2_10169Peptidyl-prolyl cis-trans isomerase CYP23. (227 aa)
ACMD2_18117Putative ATP-dependent RNA helicase DDX11. (902 aa)
ACMD2_16942Switch 2. (907 aa)
ACMD2_05677DNA repair endonuclease UVH1. (977 aa)
ACMD2_05678PPIase cyclophilin-type domain-containing protein. (347 aa)
ACMD2_15483Replication factor C subunit 5. (449 aa)
ACMD2_09958Replication factor C subunit 3. (742 aa)
ACMD2_15500Protein CUP-SHAPED COTYLEDON 1. (248 aa)
ACMD2_18891DNA ligase 1. (398 aa)
ACMD2_09990Replication factor C subunit 4. (352 aa)
ACMD2_11071Replication factor C subunit 3. (361 aa)
ACMD2_19575DNA ligase 1; Belongs to the ATP-dependent DNA ligase family. (289 aa)
ACMD2_24335Protein STICHEL-like 2. (577 aa)
ACMD2_11070Replication factor C subunit 3. (335 aa)
ACMD2_08692DNA excision repair protein ERCC-1. (417 aa)
ACMD2_22768DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (192 aa)
ACMD2_24658DNA polymerase epsilon subunit 3. (184 aa)
ACMD2_27100NAC domain-containing protein 21/22. (270 aa)
ACMD2_14115RING-box protein 1. (129 aa)
ACMD2_06824General transcription factor IIH subunit. (435 aa)
ACMD2_22393Helicase and polymerase-containing protein TEBICHI. (1395 aa)
ACMD2_00659DNA damage-binding protein 1a. (1056 aa)
ACMD2_18469DNA polymerase delta small subunit. (422 aa)
ACMD2_27139Protein NTM1-like 9. (108 aa)
ACMD2_26912Uncharacterized protein. (97 aa)
ACMD2_25776Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (160 aa)
ACMD2_22523CBFD_NFYB_HMF domain-containing protein. (208 aa)
ACMD2_08064Putative RNA polymerase II transcription factor B subunit 1-1. (416 aa)
ACMD2_24188Replication protein A 70 kDa DNA-binding subunit B. (609 aa)
ACMD2_08059Putative RNA polymerase II transcription factor B subunit 1-1. (586 aa)
ACMD2_21417Helicase and polymerase-containing protein TEBICHI. (675 aa)
ACMD2_26467Uncharacterized protein. (183 aa)
ACMD2_19665WD repeat-containing protein 76. (315 aa)
ACMD2_19280Protein CHROMATIN REMODELING 24. (984 aa)
ACMD2_17018Replication protein A 70 kDa DNA-binding subunit C. (225 aa)
ACMD2_07451NAC domain-containing protein 100. (157 aa)
ACMD2_01734Replication protein A 14 kDa subunit. (123 aa)
ACMD2_17751DNA ligase. (594 aa)
ACMD2_23419DNA cross-link repair 1 protein. (719 aa)
ACMD2_07276Uncharacterized protein. (254 aa)
ACMD2_15189Uncharacterized protein. (207 aa)
ACMD2_16250Cullin-4; Belongs to the cullin family. (788 aa)
ACMD2_02219Protein STICHEL-like 3. (1093 aa)
ACMD2_08436Replication protein A 32 kDa subunit B. (278 aa)
ACMD2_13124Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family. (525 aa)
ACMD2_05981Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (264 aa)
ACMD2_14652Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family. (295 aa)
ACMD2_09508Uncharacterized protein. (249 aa)
ACMD2_23532Cyclin-dependent kinase D-1. (176 aa)
ACMD2_23531Cyclin-dependent kinase D-1. (164 aa)
ACMD2_24611CDK-activating kinase assembly factor MAT1. (198 aa)
ACMD2_17474DNA polymerase delta subunit 3. (519 aa)
ACMD2_24563DNA repair protein UVH3. (1232 aa)
ACMD2_14138DNA polymerase delta subunit 4. (105 aa)
ACMD2_17247Protein ALWAYS EARLY 3. (1232 aa)
ACMD2_13673Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (264 aa)
ACMD2_24581DNA excision repair protein ERCC-8. (457 aa)
ACMD2_12909NAC domain-containing protein 14. (596 aa)
ACMD2_23582Uncharacterized protein. (97 aa)
ACMD2_02955RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (418 aa)
ACMD2_16046Replication protein A 14 kDa subunit. (106 aa)
ACMD2_21471Protein DAMAGED DNA-BINDING 2. (358 aa)
ACMD2_21472Protein DAMAGED DNA-BINDING 2. (227 aa)
ACMD2_21470Protein DAMAGED DNA-BINDING 2. (464 aa)
ACMD2_03854Protein STICHEL-like 2. (846 aa)
ACMD2_09818Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (631 aa)
ACMD2_07861Cyclin-H1-1; Belongs to the cyclin family. (302 aa)
ACMD2_22940Uncharacterized protein. (86 aa)
ACMD2_16919Uncharacterized protein. (159 aa)
ACMD2_22938ATPase family AAA domain-containing protein 5. (678 aa)
ACMD2_22937ATPase family AAA domain-containing protein 5. (344 aa)
ACMD2_19268Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (641 aa)
ACMD2_04396Ubiquitin receptor RAD23b. (374 aa)
ACMD2_03665DNA polymerase. (1094 aa)
ACMD2_11906DNA repair helicase XPB1. (769 aa)
ACMD2_24261Rep_fac-A_C domain-containing protein. (286 aa)
ACMD2_05136Coiled-coil domain-containing protein. (131 aa)
ACMD2_03027Replication factor C subunit 2. (341 aa)
ACMD2_05134Coiled-coil domain-containing protein. (344 aa)
ACMD2_11091Protein CUP-SHAPED COTYLEDON 1. (287 aa)
ACMD2_00917Ubiquitin receptor RAD23c. (392 aa)
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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