STRINGSTRING
AMSG_06966 AMSG_06966 AMSG_00032 AMSG_00032 AMSG_00226 AMSG_00226 AMSG_00244 AMSG_00244 AMSG_02768 AMSG_02768 AMSG_11749 AMSG_11749 AMSG_03192 AMSG_03192 AMSG_03417 AMSG_03417 AMSG_03435 AMSG_03435 AMSG_03726 AMSG_03726 AMSG_02462 AMSG_02462 AMSG_11737 AMSG_11737 AMSG_03897 AMSG_03897 AMSG_04137 AMSG_04137 AMSG_04045 AMSG_04045 AMSG_04327 AMSG_04327 AMSG_04340 AMSG_04340 AMSG_04408 AMSG_04408 AMSG_03761 AMSG_03761 AMSG_11800 AMSG_11800 AMSG_11808 AMSG_11808 AMSG_04435 AMSG_04435 AMSG_04462 AMSG_04462 LSM8 LSM8 AMSG_00467 AMSG_00467 AMSG_00434 AMSG_00434 AMSG_00468 AMSG_00468 AMSG_04178 AMSG_04178 AMSG_05025 AMSG_05025 AMSG_05062 AMSG_05062 AMSG_05252 AMSG_05252 AMSG_04458 AMSG_04458 AMSG_04793 AMSG_04793 AMSG_05450 AMSG_05450 AMSG_11948 AMSG_11948 AMSG_11897 AMSG_11897 AMSG_05947 AMSG_05947 AMSG_11925 AMSG_11925 AMSG_05725 AMSG_05725 AMSG_06169 AMSG_06169 AMSG_05327 AMSG_05327 AMSG_06813 AMSG_06813 AMSG_06843 AMSG_06843 AMSG_05643 AMSG_05643 AMSG_00624 AMSG_00624 AMSG_00861 AMSG_00861 AMSG_00748 AMSG_00748 AMSG_06602 AMSG_06602 AMSG_00821 AMSG_00821 AMSG_07094 AMSG_07094 AMSG_06712 AMSG_06712 AMSG_07210 AMSG_07210 AMSG_07064 AMSG_07064 AMSG_06442 AMSG_06442 AMSG_07305 AMSG_07305 AMSG_07663 AMSG_07663 AMSG_00641 AMSG_00641 AMSG_07539 AMSG_07539 AMSG_07861 AMSG_07861 AMSG_07729 AMSG_07729 AMSG_07111 AMSG_07111 AMSG_07947 AMSG_07947 AMSG_08189 AMSG_08189 AMSG_00939 AMSG_00939 AMSG_08226 AMSG_08226 AMSG_00993 AMSG_00993 AMSG_01012 AMSG_01012 AMSG_07407 AMSG_07407 AMSG_08027 AMSG_08027 AMSG_12187 AMSG_12187 AMSG_08468 AMSG_08468 AMSG_08479 AMSG_08479 AMSG_12221 AMSG_12221 AMSG_08250 AMSG_08250 AMSG_12251 AMSG_12251 AMSG_09202 AMSG_09202 AMSG_08865 AMSG_08865 AMSG_08862 AMSG_08862 AMSG_12204 AMSG_12204 AMSG_01218 AMSG_01218 AMSG_01299 AMSG_01299 AMSG_01280 AMSG_01280 AMSG_08958 AMSG_08958 AMSG_09035 AMSG_09035 AMSG_09504 AMSG_09504 AMSG_01376 AMSG_01376 AMSG_09630 AMSG_09630 AMSG_09252 AMSG_09252 AMSG_10031 AMSG_10031 AMSG_09989 AMSG_09989 AMSG_09995 AMSG_09995 AMSG_09678 AMSG_09678 AMSG_09713 AMSG_09713 AMSG_12300 AMSG_12300 AMSG_01464 AMSG_01464 AMSG_01502 AMSG_01502 AMSG_10191 AMSG_10191 AMSG_10590 AMSG_10590 AMSG_12309 AMSG_12309 AMSG_10920 AMSG_10920 AMSG_10678 AMSG_10678 AMSG_10968 AMSG_10968 AMSG_01733 AMSG_01733 AMSG_11048 AMSG_11048 AMSG_11060 AMSG_11060 AMSG_11199 AMSG_11199 AMSG_11215 AMSG_11215 AMSG_11387 AMSG_11387 AMSG_12398 AMSG_12398 AMSG_11014 AMSG_11014 AMSG_11388 AMSG_11388 AMSG_02093 AMSG_02093 AMSG_02344 AMSG_02344 AMSG_02404 AMSG_02404 AMSG_01948 AMSG_01948 AMSG_11530 AMSG_11530 AMSG_02261 AMSG_02261 AMSG_11515 AMSG_11515
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMSG_06966RPOL4c domain-containing protein. (137 aa)
AMSG_00032Uncharacterized protein. (652 aa)
AMSG_00226RNA polymerase II core subunit. (120 aa)
AMSG_00244KH domain-containing protein. (363 aa)
AMSG_02768Dnajc8 protein. (192 aa)
AMSG_11749Sm domain-containing protein. (81 aa)
AMSG_03192zf-U1 domain-containing protein. (264 aa)
AMSG_03417RRM domain-containing protein. (238 aa)
AMSG_03435PH domain-containing protein. (655 aa)
AMSG_03726Crooked neck. (753 aa)
AMSG_02462Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (103 aa)
AMSG_11737RRM domain-containing protein. (206 aa)
AMSG_03897DEAD-box ATP-dependent RNA helicase 21; Belongs to the DEAD box helicase family. (636 aa)
AMSG_04137U5 snRNP complex subunit. (368 aa)
AMSG_04045SAE2 domain-containing protein. (389 aa)
AMSG_04327Nucleotide binding protein. (516 aa)
AMSG_04340Uncharacterized protein. (262 aa)
AMSG_04408Nkap_C domain-containing protein. (328 aa)
AMSG_03761Spliceosomal protein on the X. (323 aa)
AMSG_11800Uncharacterized protein. (2046 aa)
AMSG_11808RRM domain-containing protein. (506 aa)
AMSG_04435DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (115 aa)
AMSG_04462Uncharacterized protein. (645 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
AMSG_00467Intron-binding protein aquarius. (1504 aa)
AMSG_00434Uncharacterized protein. (461 aa)
AMSG_00468Uncharacterized protein. (880 aa)
AMSG_04178Small nuclear ribonucleoprotein SmG. (73 aa)
AMSG_05025RRM domain-containing protein. (417 aa)
AMSG_05062Small nuclear ribonucleoprotein Sm D3. (105 aa)
AMSG_05252Uncharacterized protein. (511 aa)
AMSG_04458WD_REPEATS_REGION domain-containing protein. (337 aa)
AMSG_04793RNA splicing factor. (918 aa)
AMSG_05450G-patch domain-containing protein. (668 aa)
AMSG_11948Uncharacterized protein. (1179 aa)
AMSG_11897Uncharacterized protein. (1043 aa)
AMSG_05947RRM domain-containing protein. (127 aa)
AMSG_11925Uncharacterized protein. (1123 aa)
AMSG_05725Cyclophilin-type peptidylprolyl cis-trans isomerase. (274 aa)
AMSG_06169Puff-specific protein Bx42. (600 aa)
AMSG_05327Small nuclear ribonucleoprotein Sm D2. (104 aa)
AMSG_06813Uncharacterized protein. (774 aa)
AMSG_06843Cold shock DNA-binding protein. (96 aa)
AMSG_05643Zinc finger CCCH domain-containing protein 49. (420 aa)
AMSG_00624Elongation factor tu GTP-binding domain-containing protein 2. (1088 aa)
AMSG_00861PRP38 pre-mRNA processing factor 38 domain containing A. (343 aa)
AMSG_00748Peptidyl-prolyl cis-trans isomerase. (200 aa)
AMSG_06602Nuclear protein NAP. (614 aa)
AMSG_00821Pre-mRNA splicing protein. (142 aa)
AMSG_07094WD_REPEATS_REGION domain-containing protein. (833 aa)
AMSG_06712U4/U6.U5 tri-snRNP-associated protein. (515 aa)
AMSG_07210Peptidyl-prolyl cis-trans isomerase cyp15. (655 aa)
AMSG_07064Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (206 aa)
AMSG_06442G10 protein. (198 aa)
AMSG_07305Pumilio domain-containing protein. (665 aa)
AMSG_07663RNA helicase in the DEAH-box family protein. (786 aa)
AMSG_00641Pre-mRNA-splicing factor SYF2. (301 aa)
AMSG_07539Splicing factor PWI domain-containing protein. (359 aa)
AMSG_07861Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (207 aa)
AMSG_07729Uncharacterized protein. (695 aa)
AMSG_07111G patch domain and KOW motifs-containing protein. (477 aa)
AMSG_07947Pre-mRNA splicing factor prp46. (454 aa)
AMSG_08189PPIase cyclophilin-type domain-containing protein. (330 aa)
AMSG_00939Uncharacterized protein. (357 aa)
AMSG_08226Uncharacterized protein. (360 aa)
AMSG_00993Coiled-coil domain-containing protein 94. (327 aa)
AMSG_01012Uncharacterized protein. (384 aa)
AMSG_07407RRM domain-containing protein. (144 aa)
AMSG_08027Uncharacterized protein. (391 aa)
AMSG_12187Uncharacterized protein. (355 aa)
AMSG_08468Helicase C-terminal domain-containing protein. (701 aa)
AMSG_08479WD_REPEATS_REGION domain-containing protein. (507 aa)
AMSG_12221Uncharacterized protein. (1066 aa)
AMSG_08250RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein. (319 aa)
AMSG_12251Uncharacterized protein. (316 aa)
AMSG_09202Pre-mRNA-processing-splicing factor 8. (2345 aa)
AMSG_08865Ubiquitin family protein. (180 aa)
AMSG_08862Zinc finger protein. (235 aa)
AMSG_12204Uncharacterized protein. (1136 aa)
AMSG_01218Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (165 aa)
AMSG_01299U2 small nuclear ribonucleoprotein A. (268 aa)
AMSG_01280Leucine rich repeat containing 51. (310 aa)
AMSG_08958Zinc finger protein. (682 aa)
AMSG_09035Splicing factor 3B subunit 1. (1152 aa)
AMSG_09504Uncharacterized protein. (500 aa)
AMSG_01376Uncharacterized protein. (562 aa)
AMSG_09630WD_REPEATS_REGION domain-containing protein. (1139 aa)
AMSG_09252DNA-directed RNA polymerase II subunit rpb7. (154 aa)
AMSG_10031Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (395 aa)
AMSG_09989Uncharacterized protein. (1263 aa)
AMSG_09995Uncharacterized protein. (1145 aa)
AMSG_09678Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (120 aa)
AMSG_09713Peptidyl-prolyl cis-trans isomerase 4. (492 aa)
AMSG_12300Uncharacterized protein. (1150 aa)
AMSG_01464DNA-directed RNA polymerase I, II, and III subunit RPABC5. (64 aa)
AMSG_01502Uncharacterized protein. (294 aa)
AMSG_10191Uncharacterized protein. (560 aa)
AMSG_10590Pre-mRNA-splicing factor sap114. (736 aa)
AMSG_12309WD_REPEATS_REGION domain-containing protein; Belongs to the complex I LYR family. (286 aa)
AMSG_10920U5 small nuclear ribonucleoprotein helicase. (2137 aa)
AMSG_10678A682L protein. (612 aa)
AMSG_10968ANK_REP_REGION domain-containing protein. (212 aa)
AMSG_01733Serine-arginine protein 55. (298 aa)
AMSG_11048RRM domain-containing protein. (1395 aa)
AMSG_11060Uncharacterized protein. (318 aa)
AMSG_11199CPSF A subunit. (1205 aa)
AMSG_11215SF3B2 protein. (526 aa)
AMSG_11387RRM domain-containing protein. (440 aa)
AMSG_12398RRM domain-containing protein. (442 aa)
AMSG_11014Poly-zinc finger protein 1. (256 aa)
AMSG_11388Pre-mRNA-processing factor 17. (532 aa)
AMSG_02093U1 small nuclear ribonucleoprotein A. (228 aa)
AMSG_02344DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1198 aa)
AMSG_02404RNA-binding region RNP-1 domain-containing protein. (1412 aa)
AMSG_01948PrpF31 U4/U6*U5 snRNP-associated pre-mRNA processing factor 31. (468 aa)
AMSG_11530DNA-directed RNA polymerase II polypeptide. (212 aa)
AMSG_02261Pre-mRNA-splicing factor SLU7. (626 aa)
AMSG_11515Uncharacterized protein. (184 aa)
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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