STRINGSTRING
AMSG_07533 AMSG_07533 AMSG_07900 AMSG_07900 AMSG_12113 AMSG_12113 AMSG_07898 AMSG_07898 AMSG_07539 AMSG_07539 AMSG_07986 AMSG_07986 AMSG_07908 AMSG_07908 AMSG_08217 AMSG_08217 AMSG_12054 AMSG_12054 AMSG_06966 AMSG_06966 AMSG_08280 AMSG_08280 AMSG_08218 AMSG_08218 AMSG_00980 AMSG_00980 AMSG_01005 AMSG_01005 AMSG_11635 AMSG_11635 AMSG_07295 AMSG_07295 AMSG_07358 AMSG_07358 AMSG_12125 AMSG_12125 AMSG_08067 AMSG_08067 AMSG_01034 AMSG_01034 AMSG_08436 AMSG_08436 AMSG_08320 AMSG_08320 AMSG_08441 AMSG_08441 AMSG_12129 AMSG_12129 AMSG_08385 AMSG_08385 AMSG_01158 AMSG_01158 AMSG_08329 AMSG_08329 AMSG_08434 AMSG_08434 AMSG_08553 AMSG_08553 AMSG_08565 AMSG_08565 AMSG_07731 AMSG_07731 AMSG_08994 AMSG_08994 AMSG_08654 AMSG_08654 AMSG_08459 AMSG_08459 AMSG_08210 AMSG_08210 AMSG_08250 AMSG_08250 AMSG_09203 AMSG_09203 AMSG_00935 AMSG_00935 AMSG_00940 AMSG_00940 AMSG_09397 AMSG_09397 AMSG_00994 AMSG_00994 AMSG_08999 AMSG_08999 AMSG_09246 AMSG_09246 AMSG_09088 AMSG_09088 AMSG_12245 AMSG_12245 AMSG_09301 AMSG_09301 AMSG_08773 AMSG_08773 AMSG_08816 AMSG_08816 AMSG_12204 AMSG_12204 AMSG_01212 AMSG_01212 AMSG_01260 AMSG_01260 AMSG_01248 AMSG_01248 AMSG_01415 AMSG_01415 AMSG_01425 AMSG_01425 AMSG_09464 AMSG_09464 AMSG_12288 AMSG_12288 AMSG_09605 AMSG_09605 AMSG_01365 AMSG_01365 AMSG_01387 AMSG_01387 AMSG_09477 AMSG_09477 AMSG_09242 AMSG_09242 AMSG_09252 AMSG_09252 AMSG_09258 AMSG_09258 AMSG_09886 AMSG_09886 AMSG_09910 AMSG_09910 AMSG_09839 AMSG_09839 AMSG_12302 AMSG_12302 AMSG_09968 AMSG_09968 AMSG_10005 AMSG_10005 AMSG_10021 AMSG_10021 AMSG_09966 AMSG_09966 AMSG_10036 AMSG_10036 AMSG_09915 AMSG_09915 AMSG_10170 AMSG_10170 AMSG_09936 AMSG_09936 AMSG_10464 AMSG_10464 AMSG_10260 AMSG_10260 AMSG_10415 AMSG_10415 AMSG_01464 AMSG_01464 AMSG_09490 AMSG_09490 AMSG_01502 AMSG_01502 AMSG_09520 AMSG_09520 AMSG_12324 AMSG_12324 AMSG_10163 AMSG_10163 AMSG_01541 AMSG_01541 AMSG_10169 AMSG_10169 AMSG_01661 AMSG_01661 AMSG_09582 AMSG_09582 AMSG_09616 AMSG_09616 AMSG_12365 AMSG_12365 AMSG_10582 AMSG_10582 AMSG_10588 AMSG_10588 AMSG_10584 AMSG_10584 AMSG_10629 AMSG_10629 AMSG_10661 AMSG_10661 AMSG_10039 AMSG_10039 AMSG_10292 AMSG_10292 AMSG_12394 AMSG_12394 AMSG_10575 AMSG_10575 AMSG_10860 AMSG_10860 AMSG_12335 AMSG_12335 AMSG_12403 AMSG_12403 AMSG_10647 AMSG_10647 AMSG_10501 AMSG_10501 AMSG_10928 AMSG_10928 AMSG_12405 AMSG_12405 AMSG_11021 AMSG_11021 AMSG_11026 AMSG_11026 AMSG_10717 AMSG_10717 AMSG_01733 AMSG_01733 AMSG_10427 AMSG_10427 AMSG_11068 AMSG_11068 AMSG_10849 AMSG_10849 AMSG_01879 AMSG_01879 AMSG_12425 AMSG_12425 AMSG_12445 AMSG_12445 AMSG_12402 AMSG_12402 AMSG_11388 AMSG_11388 AMSG_02049 AMSG_02049 AMSG_11394 AMSG_11394 AMSG_02201 AMSG_02201 AMSG_02183 AMSG_02183 AMSG_02344 AMSG_02344 AMSG_02236 AMSG_02236 AMSG_11530 AMSG_11530 AMSG_02230 AMSG_02230 AMSG_02261 AMSG_02261 AMSG_02417 AMSG_02417 AMSG_02422 AMSG_02422 AMSG_11509 AMSG_11509 AMSG_02006 AMSG_02006 AMSG_02174 AMSG_02174 AMSG_02287 AMSG_02287 AMSG_11529 AMSG_11529 AMSG_03451 AMSG_03451 AMSG_03393 AMSG_03393 AMSG_00146 AMSG_00146 AMSG_00166 AMSG_00166 AMSG_00171 AMSG_00171 AMSG_03551 AMSG_03551 AMSG_03454 AMSG_03454 AMSG_03312 AMSG_03312 AMSG_00256 AMSG_00256 AMSG_00312 AMSG_00312 AMSG_03673 AMSG_03673 AMSG_03791 AMSG_03791 AMSG_03841 AMSG_03841 MED6 MED6 AMSG_02452 AMSG_02452 AMSG_02462 AMSG_02462 AMSG_11780 AMSG_11780 AMSG_02620 AMSG_02620 AMSG_02624 AMSG_02624 AMSG_02444 AMSG_02444 AMSG_03879 AMSG_03879 AMSG_03065 AMSG_03065 AMSG_03986 AMSG_03986 AMSG_04051 AMSG_04051 AMSG_03890 AMSG_03890 AMSG_04079 AMSG_04079 AMSG_11791 AMSG_11791 AMSG_02630 AMSG_02630 AMSG_04196 AMSG_04196 AMSG_04222 AMSG_04222 AMSG_04039 AMSG_04039 AMSG_03386 AMSG_03386 AMSG_04293 AMSG_04293 AMSG_04376 AMSG_04376 AMSG_04405 AMSG_04405 AMSG_03512 AMSG_03512 AMSG_04452 AMSG_04452 AMSG_04492 AMSG_04492 AMSG_04325 AMSG_04325 AMSG_04250 AMSG_04250 AMSG_04354 AMSG_04354 AMSG_03698 AMSG_03698 AMSG_11800 AMSG_11800 AMSG_04858 AMSG_04858 AMSG_03797 AMSG_03797 AMSG_04435 AMSG_04435 AMSG_04941 AMSG_04941 AMSG_04451 AMSG_04451 AMSG_02485 AMSG_02485 AMSG_04552 AMSG_04552 AMSG_00384 AMSG_00384 AMSG_04796 AMSG_04796 AMSG_00464 AMSG_00464 AMSG_00331 AMSG_00331 AMSG_03888 AMSG_03888 AMSG_00534 AMSG_00534 AMSG_03980 AMSG_03980 AMSG_04103 AMSG_04103 AMSG_04178 AMSG_04178 AMSG_00483 AMSG_00483 AMSG_04724 AMSG_04724 AMSG_05025 AMSG_05025 AMSG_11804 AMSG_11804 AMSG_04358 AMSG_04358 AMSG_05062 AMSG_05062 AMSG_05074 AMSG_05074 AMSG_04730 AMSG_04730 AMSG_05095 AMSG_05095 AMSG_04775 AMSG_04775 AMSG_05176 AMSG_05176 AMSG_05429 AMSG_05429 AMSG_05308 AMSG_05308 AMSG_05161 AMSG_05161 AMSG_05334 AMSG_05334 AMSG_11861 AMSG_11861 AMSG_04940 AMSG_04940 AMSG_00395 AMSG_00395 AMSG_05464 AMSG_05464 AMSG_05981 AMSG_05981 AMSG_05640 AMSG_05640 AMSG_06020 AMSG_06020 AMSG_06088 AMSG_06088 AMSG_04653 AMSG_04653 AMSG_04658 AMSG_04658 AMSG_06169 AMSG_06169 AMSG_11915 AMSG_11915 AMSG_11865 AMSG_11865 AMSG_05883 AMSG_05883 AMSG_11976 AMSG_11976 AMSG_06832 AMSG_06832 AMSG_06890 AMSG_06890 AMSG_06928 AMSG_06928 AMSG_05428 AMSG_05428 AMSG_06919 AMSG_06919 AMSG_00640 AMSG_00640 AMSG_00652 AMSG_00652 AMSG_06853 AMSG_06853 AMSG_00778 AMSG_00778 AMSG_00834 AMSG_00834 AMSG_00749 AMSG_00749 AMSG_06080 AMSG_06080 AMSG_06752 AMSG_06752 AMSG_07133 AMSG_07133 AMSG_06683 AMSG_06683 AMSG_06695 AMSG_06695 AMSG_06678 AMSG_06678 AMSG_06720 AMSG_06720 AMSG_07171 AMSG_07171 AMSG_07071 AMSG_07071 AMSG_06974 AMSG_06974 AMSG_07003 AMSG_07003 AMSG_06347 AMSG_06347 AMSG_06450 AMSG_06450 AMSG_06578 AMSG_06578 AMSG_07616 AMSG_07616 AMSG_12066 AMSG_12066 AMSG_07591 AMSG_07591 AMSG_07694 AMSG_07694 AMSG_11995 AMSG_11995 AMSG_00068 AMSG_00068 AMSG_00016 AMSG_00016 AMSG_00041 AMSG_00041 AMSG_00045 AMSG_00045 AMSG_00088 AMSG_00088 AMSG_00226 AMSG_00226 AMSG_00075 AMSG_00075 AMSG_00080 AMSG_00080 AMSG_00318 AMSG_00318 AMSG_00128 AMSG_00128 AMSG_00229 AMSG_00229 AMSG_00306 AMSG_00306 AMSG_02688 AMSG_02688 AMSG_00273 AMSG_00273 AMSG_02909 AMSG_02909 AMSG_02854 AMSG_02854 AMSG_11740 AMSG_11740 AMSG_02920 AMSG_02920 AMSG_03058 AMSG_03058 AMSG_03086 AMSG_03086 AMSG_11749 AMSG_11749 AMSG_02980 AMSG_02980 AMSG_03159 AMSG_03159 AMSG_03001 AMSG_03001 AMSG_03173 AMSG_03173 AMSG_03222 AMSG_03222 AMSG_03207 AMSG_03207 AMSG_03118 AMSG_03118 AMSG_03298 AMSG_03298 AMSG_03370 AMSG_03370 AMSG_03350 AMSG_03350
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMSG_07533Uncharacterized protein. (89 aa)
AMSG_07900Uncharacterized protein. (412 aa)
AMSG_12113Protein kinase domain-containing protein. (679 aa)
AMSG_07898UPF0459 protein C19orf50. (154 aa)
AMSG_07539Splicing factor PWI domain-containing protein. (359 aa)
AMSG_07986SIN1_PH domain-containing protein. (535 aa)
AMSG_07908Proteasome activator subunit. (419 aa)
AMSG_08217BSD domain-containing protein. (617 aa)
AMSG_12054Bromo domain-containing protein. (1567 aa)
AMSG_06966RPOL4c domain-containing protein. (137 aa)
AMSG_08280DDT domain-containing protein. (492 aa)
AMSG_08218Phox2. (634 aa)
AMSG_00980ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (890 aa)
AMSG_01005Classical-complement-pathway C3/C5 convertase. (241 aa)
AMSG_11635Histone H2A; Belongs to the histone H2A family. (121 aa)
AMSG_07295Enhancer of polycomb-like protein. (701 aa)
AMSG_07358CCR4-NOT transcription complex. (669 aa)
AMSG_12125C2H2-type domain-containing protein. (500 aa)
AMSG_08067Ubiquitin/ribosomal protein S27 fusion protein. (145 aa)
AMSG_01034Integrator complex subunit 11. (677 aa)
AMSG_08436FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (579 aa)
AMSG_08320CMGC/CK2 protein kinase; Belongs to the protein kinase superfamily. (394 aa)
AMSG_08441Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (227 aa)
AMSG_12129EF-hand domain-containing protein. (355 aa)
AMSG_08385Uncharacterized protein. (630 aa)
AMSG_01158Uncharacterized protein. (1023 aa)
AMSG_08329CID domain-containing protein. (264 aa)
AMSG_08434TOR kinase binding protein. (319 aa)
AMSG_08553CMGC/CDK protein kinase. (548 aa)
AMSG_08565Sm domain-containing protein. (227 aa)
AMSG_07731SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family. (219 aa)
AMSG_08994Transcription initiation factor TFIID subunit 10. (186 aa)
AMSG_08654RMI1_N domain-containing protein. (665 aa)
AMSG_08459Uncharacterized protein. (600 aa)
AMSG_08210Cyclin-C; Belongs to the cyclin family. (262 aa)
AMSG_08250RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein. (319 aa)
AMSG_09203SET domain-containing protein. (1101 aa)
AMSG_00935Transcription initiation factor TFIID subunit 13. (243 aa)
AMSG_00940Non-specific serine/threonine protein kinase. (571 aa)
AMSG_09397AGC protein kinase. (889 aa)
AMSG_00994Zinc-binding oxidoreductase CipB. (350 aa)
AMSG_08999Uncharacterized protein. (318 aa)
AMSG_09246Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (537 aa)
AMSG_09088Bromodomain adjacent to zinc finger domain-containing protein 2B. (845 aa)
AMSG_12245Uncharacterized protein. (562 aa)
AMSG_09301Transcription initiation factor TFIID subunit 5. (685 aa)
AMSG_08773TAFII55_N domain-containing protein. (292 aa)
AMSG_08816YEATS domain-containing protein 4. (197 aa)
AMSG_12204Uncharacterized protein. (1136 aa)
AMSG_01212Bromo domain-containing protein. (874 aa)
AMSG_01260Histone deacetylase 6. (1006 aa)
AMSG_01248CMGC/CK2 protein kinase; Belongs to the protein kinase superfamily. (371 aa)
AMSG_01415Sco1-family protein. (215 aa)
AMSG_01425Transcription initiation factor TFIID subunit 2. (1199 aa)
AMSG_09464Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (289 aa)
AMSG_12288RING-type domain-containing protein. (661 aa)
AMSG_09605mRNA_triPase domain-containing protein. (371 aa)
AMSG_01365Uncharacterized protein. (517 aa)
AMSG_01387RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (669 aa)
AMSG_09477Uncharacterized protein. (953 aa)
AMSG_09242Zinc-binding dehydrogenase family Oxidoreductase. (385 aa)
AMSG_09252DNA-directed RNA polymerase II subunit rpb7. (154 aa)
AMSG_09258MYB family transcription factor. (442 aa)
AMSG_09886AMPK1_CBM domain-containing protein. (695 aa)
AMSG_09910Uncharacterized protein. (843 aa)
AMSG_09839Uncharacterized protein. (283 aa)
AMSG_12302Uncharacterized protein. (874 aa)
AMSG_09968DEAD-box ATP-dependent RNA helicase 56. (425 aa)
AMSG_10005Retinoblastoma-binding protein 5. (751 aa)
AMSG_10021Thioredoxin; Belongs to the thioredoxin family. (110 aa)
AMSG_09966Uncharacterized protein. (199 aa)
AMSG_10036Glutathione-disulfide reductase. (544 aa)
AMSG_09915Thioredoxin. (483 aa)
AMSG_10170CAF1 family protein. (322 aa)
AMSG_09936snRNA-activating protein complex subunit 3. (451 aa)
AMSG_10464Histone deacetylase 6. (873 aa)
AMSG_10260Uncharacterized protein. (486 aa)
AMSG_10415Replication protein A subunit. (597 aa)
AMSG_01464DNA-directed RNA polymerase I, II, and III subunit RPABC5. (64 aa)
AMSG_09490Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (119 aa)
AMSG_01502Uncharacterized protein. (294 aa)
AMSG_09520CMGC/CK2 protein kinase. (587 aa)
AMSG_12324TPR_REGION domain-containing protein. (2920 aa)
AMSG_10163BTP domain-containing protein. (343 aa)
AMSG_01541CMGC/CK2 protein kinase. (597 aa)
AMSG_10169Geranylgeranyl transferase type-2 subunit alpha. (570 aa)
AMSG_01661Atypical/PIKK/ATR protein kinase; Belongs to the PI3/PI4-kinase family. (2913 aa)
AMSG_09582Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (214 aa)
AMSG_09616Homeobox domain-containing protein. (412 aa)
AMSG_12365EGF-like domain-containing protein. (2424 aa)
AMSG_10582CMGC/CK2 protein kinase; Belongs to the protein kinase superfamily. (462 aa)
AMSG_10588Ras-like GTP-binding protein D. (351 aa)
AMSG_10584Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (515 aa)
AMSG_10629mRNA cap guanine-N7 methyltransferase 1. (503 aa)
AMSG_10661INTS4 protein. (829 aa)
AMSG_10039Serine/threonine protein kinase. (387 aa)
AMSG_10292Peptidyl-prolyl cis-trans isomerase. (117 aa)
AMSG_12394WD_REPEATS_REGION domain-containing protein. (629 aa)
AMSG_10575RNA polymerase II subunit A domain phosphatase SSU72. (552 aa)
AMSG_10860Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. (470 aa)
AMSG_12335PKS_ER domain-containing protein. (760 aa)
AMSG_12403SAP domain-containing protein. (1278 aa)
AMSG_10647Uncharacterized protein. (133 aa)
AMSG_10501Uncharacterized protein. (1657 aa)
AMSG_10928BRO1 domain-containing protein. (920 aa)
AMSG_12405Uncharacterized protein. (804 aa)
AMSG_11021Pyridine nucleotide-disulfide oxidoreductase. (597 aa)
AMSG_11026Uncharacterized protein. (1059 aa)
AMSG_10717UPF0082 protein. (274 aa)
AMSG_01733Serine-arginine protein 55. (298 aa)
AMSG_10427Uncharacterized protein. (849 aa)
AMSG_11068RING-type domain-containing protein. (665 aa)
AMSG_10849GATA-type domain-containing protein. (563 aa)
AMSG_01879Cytochrome c oxidase assembly protein COX11. (311 aa)
AMSG_12425Fatty acid hydroxylase domain-containing protein. (572 aa)
AMSG_12445Uncharacterized protein. (469 aa)
AMSG_12402Uncharacterized protein. (820 aa)
AMSG_11388Pre-mRNA-processing factor 17. (532 aa)
AMSG_02049DUF862 domain-containing protein. (250 aa)
AMSG_11394CMGC/CDK protein kinase. (564 aa)
AMSG_02201FACT complex subunit SPT16. (1027 aa)
AMSG_02183TPR repeat-containing protein. (712 aa)
AMSG_02344DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1198 aa)
AMSG_02236Uncharacterized protein. (674 aa)
AMSG_11530DNA-directed RNA polymerase II polypeptide. (212 aa)
AMSG_02230Uncharacterized protein. (372 aa)
AMSG_02261Pre-mRNA-splicing factor SLU7. (626 aa)
AMSG_02417Homeobox domain-containing protein. (627 aa)
AMSG_02422Polycomb protein eed. (685 aa)
AMSG_11509VEFS-Box domain-containing protein. (654 aa)
AMSG_02006Transcription elongation factor SPT5. (737 aa)
AMSG_02174Cyclin mcs2; Belongs to the cyclin family. (343 aa)
AMSG_02287Cell differentiation protein rcd1. (461 aa)
AMSG_11529Uncharacterized protein. (143 aa)
AMSG_03451General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (553 aa)
AMSG_03393DUF862 domain-containing protein. (305 aa)
AMSG_00146CMGC/CK2 protein kinase; Belongs to the protein kinase superfamily. (428 aa)
AMSG_00166WD_REPEATS_REGION domain-containing protein. (1765 aa)
AMSG_00171Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (161 aa)
AMSG_03551CMGC/CK2 protein kinase. (621 aa)
AMSG_03454PKS_ER domain-containing protein. (884 aa)
AMSG_03312Transcription elongation factor S-II. (302 aa)
AMSG_00256Non-specific serine/threonine protein kinase. (970 aa)
AMSG_00312RNA recognition domain-containing protein containing protein. (318 aa)
AMSG_03673NOT2_3_5 domain-containing protein. (336 aa)
AMSG_03791Cell division control protein 2; Belongs to the protein kinase superfamily. (287 aa)
AMSG_03841SANT domain-containing protein. (833 aa)
MED6Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (231 aa)
AMSG_02452BRCT domain-containing protein. (299 aa)
AMSG_02462Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (103 aa)
AMSG_11780Uncharacterized protein. (1995 aa)
AMSG_02620CMGC/CK2 protein kinase. (646 aa)
AMSG_02624Uncharacterized protein. (502 aa)
AMSG_02444Histone H2B; Belongs to the histone H2B family. (93 aa)
AMSG_03879Uncharacterized protein. (125 aa)
AMSG_03065Uncharacterized protein. (757 aa)
AMSG_03986AGC/PDK1 protein kinase; Belongs to the protein kinase superfamily. (441 aa)
AMSG_04051CstF-50. (464 aa)
AMSG_03890Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (107 aa)
AMSG_04079Homeobox domain-containing protein. (237 aa)
AMSG_11791VWFA domain-containing protein. (718 aa)
AMSG_02630TNase-like domain-containing protein. (342 aa)
AMSG_04196Zinc binding dehydrogenase. (407 aa)
AMSG_04222CBS domain-containing protein. (320 aa)
AMSG_04039Uncharacterized protein. (681 aa)
AMSG_03386AGC/AKT protein kinase. (755 aa)
AMSG_04293General transcription factor IIH subunit 3. (382 aa)
AMSG_04376Uncharacterized protein. (678 aa)
AMSG_04405THO complex subunit 2. (1585 aa)
AMSG_03512Uncharacterized protein. (970 aa)
AMSG_04452WD-repeat protein mip1. (1400 aa)
AMSG_04492Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (300 aa)
AMSG_04325Apoptosis-inducing factor 2. (431 aa)
AMSG_04250GARNL1 protein. (1768 aa)
AMSG_04354Uncharacterized protein. (726 aa)
AMSG_03698BMH1 protein; Belongs to the 14-3-3 family. (899 aa)
AMSG_11800Uncharacterized protein. (2046 aa)
AMSG_04858Helicase. (1348 aa)
AMSG_03797AGC/AKT protein kinase. (734 aa)
AMSG_04435DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (115 aa)
AMSG_04941Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (459 aa)
AMSG_04451General transcription factor IIH subunit. (428 aa)
AMSG_02485PH domain-containing protein. (490 aa)
AMSG_04552BUD32 protein kinase. (266 aa)
AMSG_00384CMGC/CK2 protein kinase. (584 aa)
AMSG_04796ATPase family AAA domain-containing protein 2. (1198 aa)
AMSG_00464Peptidyl-prolyl cis-trans isomerase. (161 aa)
AMSG_00331TFIIH basal transcription factor complex helicase subunit. (816 aa)
AMSG_03888Uncharacterized protein. (320 aa)
AMSG_00534Glucose-6-phosphate isomerase; Belongs to the GPI family. (561 aa)
AMSG_03980RING-type domain-containing protein. (305 aa)
AMSG_04103Zinc-containing alcohol dehydrogenase superfamily protein. (351 aa)
AMSG_04178Small nuclear ribonucleoprotein SmG. (73 aa)
AMSG_00483Uncharacterized protein. (673 aa)
AMSG_04724Histone H3; Belongs to the histone H2B family. (339 aa)
AMSG_05025RRM domain-containing protein. (417 aa)
AMSG_11804Uncharacterized protein. (1837 aa)
AMSG_04358ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (609 aa)
AMSG_05062Small nuclear ribonucleoprotein Sm D3. (105 aa)
AMSG_05074RNA pol II accessory factor. (411 aa)
AMSG_04730Transcription factor Dp-1. (376 aa)
AMSG_05095Deacetylase. (753 aa)
AMSG_04775Uncharacterized protein. (448 aa)
AMSG_05176CMGC/CK2 protein kinase. (599 aa)
AMSG_05429RRM domain-containing protein. (323 aa)
AMSG_05308Uncharacterized protein. (710 aa)
AMSG_05161SH2 domain-containing protein. (1799 aa)
AMSG_05334CCR4-NOT transcription complex subunit 1. (2398 aa)
AMSG_11861Uncharacterized protein. (1236 aa)
AMSG_0494014-3-3 family protein epsilon; Belongs to the 14-3-3 family. (249 aa)
AMSG_00395Uncharacterized protein. (739 aa)
AMSG_05464Cyclin; Belongs to the cyclin family. (291 aa)
AMSG_05981AGC protein kinase. (720 aa)
AMSG_05640GGACT domain-containing protein. (359 aa)
AMSG_06020Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. (183 aa)
AMSG_06088Uncharacterized protein. (1585 aa)
AMSG_04653RMI1_N domain-containing protein. (246 aa)
AMSG_04658Uncharacterized protein. (321 aa)
AMSG_06169Puff-specific protein Bx42. (600 aa)
AMSG_11915Uncharacterized protein. (440 aa)
AMSG_11865ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (978 aa)
AMSG_05883CMGC/CK2 protein kinase. (807 aa)
AMSG_11976Histone H2B; Belongs to the histone H2B family. (411 aa)
AMSG_06832Histone H2A; Belongs to the histone H2A family. (300 aa)
AMSG_06890Serine/threonine protein kinase. (586 aa)
AMSG_06928Cold-induced protein. (623 aa)
AMSG_05428Sestrin-1. (579 aa)
AMSG_06919Transcription initiation factor TFIID subunit 12. (116 aa)
AMSG_00640Proteasome subunit alpha type. (241 aa)
AMSG_00652Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (268 aa)
AMSG_06853SLBP_RNA_bind domain-containing protein. (224 aa)
AMSG_00778N-myc downstream regulated. (246 aa)
AMSG_00834Histone H2A; Belongs to the histone H2A family. (446 aa)
AMSG_00749CMGC/CDK protein kinase. (643 aa)
AMSG_06080Cytoplasmic RNA-binding protein. (194 aa)
AMSG_06752Actin superfamily protein; Belongs to the actin family. (499 aa)
AMSG_07133Serine-protein kinase ATM; Belongs to the PI3/PI4-kinase family. (3306 aa)
AMSG_06683Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (537 aa)
AMSG_06695Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (314 aa)
AMSG_06678Uncharacterized protein. (432 aa)
AMSG_06720Coiled-coil domain containing 96. (553 aa)
AMSG_07171Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily. (418 aa)
AMSG_07071DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1029 aa)
AMSG_06974CMGC/CK2 protein kinase. (470 aa)
AMSG_07003Cleavage and polyadenylation specificity factor subunit 2. (748 aa)
AMSG_06347SWIB domain-containing protein. (512 aa)
AMSG_06450Thioredoxin; Belongs to the thioredoxin family. (135 aa)
AMSG_065783'-5' exonuclease. (324 aa)
AMSG_07616Peptidylprolyl isomerase. (1194 aa)
AMSG_12066Uncharacterized protein. (549 aa)
AMSG_07591Uncharacterized protein. (425 aa)
AMSG_07694CYCLIN domain-containing protein; Belongs to the cyclin family. (342 aa)
AMSG_11995Uncharacterized protein. (1219 aa)
AMSG_00068DNA topoisomerase 2-binding protein 1. (1103 aa)
AMSG_00016Ethylene-responsive element-binding protein. (218 aa)
AMSG_000413'-5' exonuclease. (451 aa)
AMSG_00045Cell cycle checkpoint control protein RAD9A. (453 aa)
AMSG_00088Cleavage stimulation factor 77 kDa subunit. (744 aa)
AMSG_00226RNA polymerase II core subunit. (120 aa)
AMSG_00075TFIIB-type domain-containing protein. (349 aa)
AMSG_00080WD40-repeat protein. (307 aa)
AMSG_00318Cleavage and polyadenylation specificity factor subunit 4. (312 aa)
AMSG_00128Spt4 domain-containing protein. (130 aa)
AMSG_00229SPRY domain-containing protein. (383 aa)
AMSG_00306Patentmatch against protein AC Tremblnew. (352 aa)
AMSG_02688CMGC/CDK/CDK5 protein kinase; Belongs to the protein kinase superfamily. (311 aa)
AMSG_00273Uncharacterized protein. (105 aa)
AMSG_02909Casein kinase II; Belongs to the protein kinase superfamily. (337 aa)
AMSG_02854Uncharacterized protein. (916 aa)
AMSG_11740Uncharacterized protein. (1375 aa)
AMSG_02920Thioredoxin. (456 aa)
AMSG_03058Proteasome activator complex subunit 2. (334 aa)
AMSG_03086RTR1-type domain-containing protein. (436 aa)
AMSG_11749Sm domain-containing protein. (81 aa)
AMSG_02980TATA-box-binding protein 2. (194 aa)
AMSG_03159Class II RPD3 type histone deacetylase. (445 aa)
AMSG_030015'-AMP-activated protein kinase gamma-1 subunit. (376 aa)
AMSG_03173RING-type domain-containing protein. (295 aa)
AMSG_03222Glutaminase isoform. (1330 aa)
AMSG_03207Cytochrome c oxidase polypeptide vib. (89 aa)
AMSG_03118CAMK/CAMKL/CHK1 protein kinase. (520 aa)
AMSG_03298Uncharacterized protein. (994 aa)
AMSG_03370Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (291 aa)
AMSG_03350EF-hand domain-containing protein. (621 aa)
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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