STRINGSTRING
AMSG_04178 AMSG_04178 AMSG_11749 AMSG_11749 AMSG_02462 AMSG_02462 AMSG_05062 AMSG_05062 AMSG_06853 AMSG_06853 AMSG_08565 AMSG_08565
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMSG_04178Small nuclear ribonucleoprotein SmG. (73 aa)
AMSG_11749Sm domain-containing protein. (81 aa)
AMSG_02462Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (103 aa)
AMSG_05062Small nuclear ribonucleoprotein Sm D3. (105 aa)
AMSG_06853SLBP_RNA_bind domain-containing protein. (224 aa)
AMSG_08565Sm domain-containing protein. (227 aa)
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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