(24 nodes) COPI-independent Golgi-to-ER retrograde traffic, and Microtubule plus-end binding network (Drosophila pseudoobscura)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0R3NJU1	Uncharacterized protein, isoform C. (2178 aa)
	A0A0R3NPT8	Transforming acidic coiled-coil-containing protein 3. (1221 aa)
	A0A0R3NR04	Microtubule-associated protein, RP/EB family. (304 aa)
	DpseGA26006	Uncharacterized protein, isoform B. (672 aa)
	DpseGA25463	Uncharacterized protein, isoform E. (2138 aa)
	DpseGA22798	Uncharacterized protein, isoform E. (664 aa)
	DpseGA20400	Uncharacterized protein, isoform B. (4663 aa)
	DpseGA25935	Uncharacterized protein, isoform A. (1706 aa)
	DpseGA26088	Uncharacterized protein. (4227 aa)
	GA29083	Serine/threonine-protein kinase GA29083; Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. CaMK subfamily. (755 aa)
	DpseGA28334	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (464 aa)
	DpseGA27686	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (447 aa)
	DpseGA27781	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (398 aa)
	B5DWK0	Uncharacterized protein, isoform C. (455 aa)
	B5DXF5	Dynein light intermediate chain 1, cytosolic. (451 aa)
	B5DY15	Microtubule-associated protein, RP/EB family. (229 aa)
	Q28WU4	Uncharacterized protein, isoform A. (454 aa)
	Q290W1	Microtubule-associated protein, RP/EB family. (257 aa)
	Q293W1	Uncharacterized protein. (458 aa)
	Q294S5	Uncharacterized protein. (450 aa)
	Q29BM0	Uncharacterized protein. (446 aa)
	DpseGA20973	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (464 aa)
	DpseGA15140	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (528 aa)
	DpseGA12306	Uncharacterized protein. (1212 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3NJU1	A0A0R3NPT8	A0A0R3NJU1	A0A0R3NPT8	Uncharacterized protein, isoform C.	Transforming acidic coiled-coil-containing protein 3.	0.866
A0A0R3NJU1	A0A0R3NR04	A0A0R3NJU1	A0A0R3NR04	Uncharacterized protein, isoform C.	Microtubule-associated protein, RP/EB family.	0.854
A0A0R3NJU1	B5DWK0	A0A0R3NJU1	B5DWK0	Uncharacterized protein, isoform C.	Uncharacterized protein, isoform C.	0.737
A0A0R3NJU1	B5DY15	A0A0R3NJU1	B5DY15	Uncharacterized protein, isoform C.	Microtubule-associated protein, RP/EB family.	0.854
A0A0R3NJU1	DpseGA12306	A0A0R3NJU1	Q2M179	Uncharacterized protein, isoform C.	Uncharacterized protein.	0.602
A0A0R3NJU1	DpseGA20973	A0A0R3NJU1	Q29D43	Uncharacterized protein, isoform C.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.807
A0A0R3NJU1	DpseGA25463	A0A0R3NJU1	A0A0R3NWA0	Uncharacterized protein, isoform C.	Uncharacterized protein, isoform E.	0.714
A0A0R3NJU1	DpseGA25935	A0A0R3NJU1	B5DI99	Uncharacterized protein, isoform C.	Uncharacterized protein, isoform A.	0.714
A0A0R3NJU1	DpseGA26006	A0A0R3NJU1	A0A0R3NST0	Uncharacterized protein, isoform C.	Uncharacterized protein, isoform B.	0.524
A0A0R3NJU1	DpseGA27686	A0A0R3NJU1	B5DUR1	Uncharacterized protein, isoform C.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.737
A0A0R3NJU1	DpseGA27781	A0A0R3NJU1	B5DVD2	Uncharacterized protein, isoform C.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.737
A0A0R3NJU1	DpseGA28334	A0A0R3NJU1	B5DM57	Uncharacterized protein, isoform C.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.737
A0A0R3NJU1	Q28WU4	A0A0R3NJU1	Q28WU4	Uncharacterized protein, isoform C.	Uncharacterized protein, isoform A.	0.737
A0A0R3NJU1	Q290W1	A0A0R3NJU1	Q290W1	Uncharacterized protein, isoform C.	Microtubule-associated protein, RP/EB family.	0.854
A0A0R3NJU1	Q293W1	A0A0R3NJU1	Q293W1	Uncharacterized protein, isoform C.	Uncharacterized protein.	0.807
A0A0R3NJU1	Q294S5	A0A0R3NJU1	Q294S5	Uncharacterized protein, isoform C.	Uncharacterized protein.	0.807
A0A0R3NJU1	Q29BM0	A0A0R3NJU1	Q29BM0	Uncharacterized protein, isoform C.	Uncharacterized protein.	0.737
A0A0R3NPT8	A0A0R3NJU1	A0A0R3NPT8	A0A0R3NJU1	Transforming acidic coiled-coil-containing protein 3.	Uncharacterized protein, isoform C.	0.866
A0A0R3NR04	A0A0R3NJU1	A0A0R3NR04	A0A0R3NJU1	Microtubule-associated protein, RP/EB family.	Uncharacterized protein, isoform C.	0.854
A0A0R3NR04	B5DWK0	A0A0R3NR04	B5DWK0	Microtubule-associated protein, RP/EB family.	Uncharacterized protein, isoform C.	0.551