(12 nodes) Mixed, incl. Orange domain, and Enhancer of split M4 family network (Drosophila pseudoobscura)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Q296Y0	Hairy and enhancer of split, invertebrate. (188 aa)
	Q296Y1	Hairy and enhancer of split, invertebrate. (214 aa)
	Q296Y2	Hairy and enhancer of split, invertebrate. (200 aa)
	Q296Y3	Uncharacterized protein. (143 aa)
	Q296Y5	Uncharacterized protein. (236 aa)
	Q296Y6	Hairy and enhancer of split, invertebrate. (219 aa)
	Q296Y7	Uncharacterized protein. (156 aa)
	Q296Y9	Uncharacterized protein. (76 aa)
	Q296Z0	Hairy and enhancer of split, invertebrate. (206 aa)
	DpseGA18719	Uncharacterized protein. (157 aa)
	DpseGA15923	Uncharacterized protein. (94 aa)
	DpseGA17423	Uncharacterized protein. (151 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DpseGA15923	DpseGA17423	Q2M181	Q2M182	Uncharacterized protein.	Uncharacterized protein.	0.463
DpseGA15923	DpseGA18719	Q2M181	Q2M180	Uncharacterized protein.	Uncharacterized protein.	0.820
DpseGA15923	Q296Y0	Q2M181	Q296Y0	Uncharacterized protein.	Hairy and enhancer of split, invertebrate.	0.567
DpseGA15923	Q296Y1	Q2M181	Q296Y1	Uncharacterized protein.	Hairy and enhancer of split, invertebrate.	0.723
DpseGA15923	Q296Y3	Q2M181	Q296Y3	Uncharacterized protein.	Uncharacterized protein.	0.409
DpseGA15923	Q296Y7	Q2M181	Q296Y7	Uncharacterized protein.	Uncharacterized protein.	0.822
DpseGA17423	DpseGA15923	Q2M182	Q2M181	Uncharacterized protein.	Uncharacterized protein.	0.463
DpseGA17423	Q296Y2	Q2M182	Q296Y2	Uncharacterized protein.	Hairy and enhancer of split, invertebrate.	0.499
DpseGA17423	Q296Y5	Q2M182	Q296Y5	Uncharacterized protein.	Uncharacterized protein.	0.501
DpseGA17423	Q296Y9	Q2M182	Q296Y9	Uncharacterized protein.	Uncharacterized protein.	0.448
DpseGA17423	Q296Z0	Q2M182	Q296Z0	Uncharacterized protein.	Hairy and enhancer of split, invertebrate.	0.499
DpseGA18719	DpseGA15923	Q2M180	Q2M181	Uncharacterized protein.	Uncharacterized protein.	0.820
DpseGA18719	Q296Y0	Q2M180	Q296Y0	Uncharacterized protein.	Hairy and enhancer of split, invertebrate.	0.656
DpseGA18719	Q296Y1	Q2M180	Q296Y1	Uncharacterized protein.	Hairy and enhancer of split, invertebrate.	0.728
DpseGA18719	Q296Y7	Q2M180	Q296Y7	Uncharacterized protein.	Uncharacterized protein.	0.563
DpseGA18719	Q296Z0	Q2M180	Q296Z0	Uncharacterized protein.	Hairy and enhancer of split, invertebrate.	0.597
Q296Y0	DpseGA15923	Q296Y0	Q2M181	Hairy and enhancer of split, invertebrate.	Uncharacterized protein.	0.567
Q296Y0	DpseGA18719	Q296Y0	Q2M180	Hairy and enhancer of split, invertebrate.	Uncharacterized protein.	0.656
Q296Y0	Q296Y1	Q296Y0	Q296Y1	Hairy and enhancer of split, invertebrate.	Hairy and enhancer of split, invertebrate.	0.898
Q296Y0	Q296Y3	Q296Y0	Q296Y3	Hairy and enhancer of split, invertebrate.	Uncharacterized protein.	0.770