(21 nodes) Mixed, incl. Regulatory CLIP domain of proteinases, and Activation of Matrix Metalloproteinases network (Drosophila pseudoobscura)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0R3NVI3	Uncharacterized protein, isoform A. (288 aa)
	DpseGA25897	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (271 aa)
	DpseGA29033	Peptidase S1 domain-containing protein. (292 aa)
	DpseGA26497	Peptidase S1 domain-containing protein. (341 aa)
	DpseGA23440	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (270 aa)
	B5DYL5	Uncharacterized protein, isoform A. (515 aa)
	B5DYT9	Uncharacterized protein. (298 aa)
	B5DYZ9	Uncharacterized protein. (278 aa)
	B5DZ71	Uncharacterized protein, isoform A. (316 aa)
	B5DZL2	Uncharacterized protein. (366 aa)
	B5DZL3	Uncharacterized protein, isoform A. (376 aa)
	Q28XG5	Uncharacterized protein. (366 aa)
	Q28Y63	Uncharacterized protein, isoform A. (462 aa)
	Q295D5	Uncharacterized protein. (397 aa)
	Q295R4	Uncharacterized protein. (282 aa)
	Q299U3	Uncharacterized protein, isoform B. (370 aa)
	Q29AG6	Uncharacterized protein. (258 aa)
	DpseGA14830	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (261 aa)
	DpseGA21954	Peptidase S1 domain-containing protein. (287 aa)
	DpseGA21379	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (271 aa)
	DpseGA16805	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (258 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3NVI3	B5DYT9	A0A0R3NVI3	B5DYT9	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.410
B5DYL5	B5DZ71	B5DYL5	B5DZ71	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform A.	0.519
B5DYL5	DpseGA21379	B5DYL5	Q29L26	Uncharacterized protein, isoform A.	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	0.537
B5DYL5	DpseGA21954	B5DYL5	Q29IJ6	Uncharacterized protein, isoform A.	Peptidase S1 domain-containing protein.	0.477
B5DYL5	DpseGA26497	B5DYL5	B5DMX1	Uncharacterized protein, isoform A.	Peptidase S1 domain-containing protein.	0.475
B5DYL5	Q29AG6	B5DYL5	Q29AG6	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.511
B5DYT9	A0A0R3NVI3	B5DYT9	A0A0R3NVI3	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.410
B5DYT9	DpseGA21954	B5DYT9	Q29IJ6	Uncharacterized protein.	Peptidase S1 domain-containing protein.	0.401
B5DYT9	DpseGA29033	B5DYT9	B5DJV1	Uncharacterized protein.	Peptidase S1 domain-containing protein.	0.426
B5DYT9	Q29AG6	B5DYT9	Q29AG6	Uncharacterized protein.	Uncharacterized protein.	0.482
B5DYZ9	B5DZ71	B5DYZ9	B5DZ71	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.500
B5DYZ9	B5DZL2	B5DYZ9	B5DZL2	Uncharacterized protein.	Uncharacterized protein.	0.507
B5DYZ9	B5DZL3	B5DYZ9	B5DZL3	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.506
B5DYZ9	DpseGA14830	B5DYZ9	Q29D38	Uncharacterized protein.	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	0.519
B5DYZ9	DpseGA16805	B5DYZ9	Q2M0F6	Uncharacterized protein.	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	0.867
B5DYZ9	DpseGA21379	B5DYZ9	Q29L26	Uncharacterized protein.	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	0.517
B5DYZ9	DpseGA23440	B5DYZ9	B5DPW8	Uncharacterized protein.	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	0.508
B5DYZ9	DpseGA25897	B5DYZ9	B5DI22	Uncharacterized protein.	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	0.515
B5DYZ9	DpseGA26497	B5DYZ9	B5DMX1	Uncharacterized protein.	Peptidase S1 domain-containing protein.	0.497
B5DYZ9	DpseGA29033	B5DYZ9	B5DJV1	Uncharacterized protein.	Peptidase S1 domain-containing protein.	0.424