(6 nodes) Methylguanosine-cap decapping network (Drosophila pseudoobscura)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Q28X08	U6 snRNA-associated Sm-like protein LSm1. (137 aa)
	Q292R0	MRNA-decapping enzyme 1B. (343 aa)
	Q297H9	DNA topoisomerase 2-associated protein PAT1. (979 aa)
	DpseGA19417	Ge1_WD40 domain-containing protein. (1391 aa)
	DpseGA19506	Uncharacterized protein, isoform A. (685 aa)
	DpseGA19405	Nudix hydrolase domain-containing protein. (817 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DpseGA19405	DpseGA19417	Q2M0K0	Q29M44	Nudix hydrolase domain-containing protein.	Ge1_WD40 domain-containing protein.	0.988
DpseGA19405	DpseGA19506	Q2M0K0	Q2LYI8	Nudix hydrolase domain-containing protein.	Uncharacterized protein, isoform A.	0.997
DpseGA19405	Q28X08	Q2M0K0	Q28X08	Nudix hydrolase domain-containing protein.	U6 snRNA-associated Sm-like protein LSm1.	0.956
DpseGA19405	Q292R0	Q2M0K0	Q292R0	Nudix hydrolase domain-containing protein.	MRNA-decapping enzyme 1B.	0.998
DpseGA19405	Q297H9	Q2M0K0	Q297H9	Nudix hydrolase domain-containing protein.	DNA topoisomerase 2-associated protein PAT1.	0.997
DpseGA19417	DpseGA19405	Q29M44	Q2M0K0	Ge1_WD40 domain-containing protein.	Nudix hydrolase domain-containing protein.	0.988
DpseGA19417	DpseGA19506	Q29M44	Q2LYI8	Ge1_WD40 domain-containing protein.	Uncharacterized protein, isoform A.	0.964
DpseGA19417	Q28X08	Q29M44	Q28X08	Ge1_WD40 domain-containing protein.	U6 snRNA-associated Sm-like protein LSm1.	0.807
DpseGA19417	Q292R0	Q29M44	Q292R0	Ge1_WD40 domain-containing protein.	MRNA-decapping enzyme 1B.	0.990
DpseGA19417	Q297H9	Q29M44	Q297H9	Ge1_WD40 domain-containing protein.	DNA topoisomerase 2-associated protein PAT1.	0.957
DpseGA19506	DpseGA19405	Q2LYI8	Q2M0K0	Uncharacterized protein, isoform A.	Nudix hydrolase domain-containing protein.	0.997
DpseGA19506	DpseGA19417	Q2LYI8	Q29M44	Uncharacterized protein, isoform A.	Ge1_WD40 domain-containing protein.	0.964
DpseGA19506	Q28X08	Q2LYI8	Q28X08	Uncharacterized protein, isoform A.	U6 snRNA-associated Sm-like protein LSm1.	0.854
DpseGA19506	Q292R0	Q2LYI8	Q292R0	Uncharacterized protein, isoform A.	MRNA-decapping enzyme 1B.	0.979
DpseGA19506	Q297H9	Q2LYI8	Q297H9	Uncharacterized protein, isoform A.	DNA topoisomerase 2-associated protein PAT1.	0.976
Q28X08	DpseGA19405	Q28X08	Q2M0K0	U6 snRNA-associated Sm-like protein LSm1.	Nudix hydrolase domain-containing protein.	0.956
Q28X08	DpseGA19417	Q28X08	Q29M44	U6 snRNA-associated Sm-like protein LSm1.	Ge1_WD40 domain-containing protein.	0.807
Q28X08	DpseGA19506	Q28X08	Q2LYI8	U6 snRNA-associated Sm-like protein LSm1.	Uncharacterized protein, isoform A.	0.854
Q28X08	Q292R0	Q28X08	Q292R0	U6 snRNA-associated Sm-like protein LSm1.	MRNA-decapping enzyme 1B.	0.886
Q28X08	Q297H9	Q28X08	Q297H9	U6 snRNA-associated Sm-like protein LSm1.	DNA topoisomerase 2-associated protein PAT1.	0.998