6 items (Drosophila pseudoobscura) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DpseGA27654	Uncharacterized protein. (173 aa)
	Q296B8	DNA-directed RNA polymerases I, II, and III subunit RPABC2. (131 aa)
	Q298X6	DNA-directed RNA polymerase II subunit RPB2. (1176 aa)
	Q299B2	DNA-directed RNA polymerase II subunit RPB9. (134 aa)
	DpseGA20659	RPOLD domain-containing protein. (275 aa)
	DpseGA19897	RNA_pol_L_2 domain-containing protein. (117 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DpseGA19897	DpseGA20659	Q29MR4	Q29K78	RNA_pol_L_2 domain-containing protein.	RPOLD domain-containing protein.	0.999
DpseGA19897	DpseGA27654	Q29MR4	Q294T7	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.999
DpseGA19897	Q296B8	Q29MR4	Q296B8	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	0.999
DpseGA19897	Q298X6	Q29MR4	Q298X6	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerase II subunit RPB2.	0.998
DpseGA19897	Q299B2	Q29MR4	Q299B2	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerase II subunit RPB9.	0.999
DpseGA20659	DpseGA19897	Q29K78	Q29MR4	RPOLD domain-containing protein.	RNA_pol_L_2 domain-containing protein.	0.999
DpseGA20659	DpseGA27654	Q29K78	Q294T7	RPOLD domain-containing protein.	Uncharacterized protein.	0.998
DpseGA20659	Q296B8	Q29K78	Q296B8	RPOLD domain-containing protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	0.999
DpseGA20659	Q298X6	Q29K78	Q298X6	RPOLD domain-containing protein.	DNA-directed RNA polymerase II subunit RPB2.	0.999
DpseGA20659	Q299B2	Q29K78	Q299B2	RPOLD domain-containing protein.	DNA-directed RNA polymerase II subunit RPB9.	0.998
DpseGA27654	DpseGA19897	Q294T7	Q29MR4	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.999
DpseGA27654	DpseGA20659	Q294T7	Q29K78	Uncharacterized protein.	RPOLD domain-containing protein.	0.998
DpseGA27654	Q296B8	Q294T7	Q296B8	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	0.998
DpseGA27654	Q298X6	Q294T7	Q298X6	Uncharacterized protein.	DNA-directed RNA polymerase II subunit RPB2.	0.998
DpseGA27654	Q299B2	Q294T7	Q299B2	Uncharacterized protein.	DNA-directed RNA polymerase II subunit RPB9.	0.998
Q296B8	DpseGA19897	Q296B8	Q29MR4	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	RNA_pol_L_2 domain-containing protein.	0.999
Q296B8	DpseGA20659	Q296B8	Q29K78	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	RPOLD domain-containing protein.	0.999
Q296B8	DpseGA27654	Q296B8	Q294T7	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	Uncharacterized protein.	0.998
Q296B8	Q298X6	Q296B8	Q298X6	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	DNA-directed RNA polymerase II subunit RPB2.	0.999
Q296B8	Q299B2	Q296B8	Q299B2	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	DNA-directed RNA polymerase II subunit RPB9.	0.999