5 items (Drosophila pseudoobscura) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B5E1D3	DNA-directed RNA polymerases I, II, and III subunit RPABC4. (57 aa)
	Q29AR6	DNA-directed RNA polymerase I subunit RPA12. (121 aa)
	Q29BZ5	DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
	DpseGA10493	RNA_pol_L_2 domain-containing protein. (110 aa)
	DpseGA10862	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (149 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B5E1D3	DpseGA10493	B5E1D3	Q29CK4	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	RNA_pol_L_2 domain-containing protein.	0.998
B5E1D3	DpseGA10862	B5E1D3	Q2M0A5	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
B5E1D3	Q29AR6	B5E1D3	Q29AR6	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	DNA-directed RNA polymerase I subunit RPA12.	0.998
B5E1D3	Q29BZ5	B5E1D3	Q29BZ5	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	DNA-directed RNA polymerases I, II, and III subunit RPABC5.	0.999
DpseGA10493	B5E1D3	Q29CK4	B5E1D3	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	0.998
DpseGA10493	DpseGA10862	Q29CK4	Q2M0A5	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
DpseGA10493	Q29AR6	Q29CK4	Q29AR6	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerase I subunit RPA12.	0.999
DpseGA10493	Q29BZ5	Q29CK4	Q29BZ5	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC5.	0.999
DpseGA10862	B5E1D3	Q2M0A5	B5E1D3	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	0.999
DpseGA10862	DpseGA10493	Q2M0A5	Q29CK4	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	RNA_pol_L_2 domain-containing protein.	0.999
DpseGA10862	Q29AR6	Q2M0A5	Q29AR6	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	DNA-directed RNA polymerase I subunit RPA12.	0.999
DpseGA10862	Q29BZ5	Q2M0A5	Q29BZ5	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	DNA-directed RNA polymerases I, II, and III subunit RPABC5.	0.999
Q29AR6	B5E1D3	Q29AR6	B5E1D3	DNA-directed RNA polymerase I subunit RPA12.	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	0.998
Q29AR6	DpseGA10493	Q29AR6	Q29CK4	DNA-directed RNA polymerase I subunit RPA12.	RNA_pol_L_2 domain-containing protein.	0.999
Q29AR6	DpseGA10862	Q29AR6	Q2M0A5	DNA-directed RNA polymerase I subunit RPA12.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
Q29AR6	Q29BZ5	Q29AR6	Q29BZ5	DNA-directed RNA polymerase I subunit RPA12.	DNA-directed RNA polymerases I, II, and III subunit RPABC5.	0.998
Q29BZ5	B5E1D3	Q29BZ5	B5E1D3	DNA-directed RNA polymerases I, II, and III subunit RPABC5.	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	0.999
Q29BZ5	DpseGA10493	Q29BZ5	Q29CK4	DNA-directed RNA polymerases I, II, and III subunit RPABC5.	RNA_pol_L_2 domain-containing protein.	0.999
Q29BZ5	DpseGA10862	Q29BZ5	Q2M0A5	DNA-directed RNA polymerases I, II, and III subunit RPABC5.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
Q29BZ5	Q29AR6	Q29BZ5	Q29AR6	DNA-directed RNA polymerases I, II, and III subunit RPABC5.	DNA-directed RNA polymerase I subunit RPA12.	0.998