7 items (Drosophila pseudoobscura) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Q298N3	DNA-directed RNA polymerase III subunit RPC6. (293 aa)
	RpII215	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1889 aa)
	DpseGA12515	Uncharacterized protein. (257 aa)
	DpseGA18324	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1363 aa)
	DpseGA20108	DNA primase; Belongs to the eukaryotic-type primase small subunit family. (438 aa)
	DpseGA20275	Uncharacterized protein. (240 aa)
	Q298X6	DNA-directed RNA polymerase II subunit RPB2. (1176 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DpseGA12515	DpseGA20275	Q29JY4	Q2LZ71	Uncharacterized protein.	Uncharacterized protein.	0.699
DpseGA12515	Q298N3	Q29JY4	Q298N3	Uncharacterized protein.	DNA-directed RNA polymerase III subunit RPC6.	0.613
DpseGA12515	Q298X6	Q29JY4	Q298X6	Uncharacterized protein.	DNA-directed RNA polymerase II subunit RPB2.	0.947
DpseGA18324	Q298X6	Q29LI1	Q298X6	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	DNA-directed RNA polymerase II subunit RPB2.	0.761
DpseGA20275	DpseGA12515	Q2LZ71	Q29JY4	Uncharacterized protein.	Uncharacterized protein.	0.699
DpseGA20275	Q298N3	Q2LZ71	Q298N3	Uncharacterized protein.	DNA-directed RNA polymerase III subunit RPC6.	0.998
DpseGA20275	Q298X6	Q2LZ71	Q298X6	Uncharacterized protein.	DNA-directed RNA polymerase II subunit RPB2.	0.947
Q298N3	DpseGA12515	Q298N3	Q29JY4	DNA-directed RNA polymerase III subunit RPC6.	Uncharacterized protein.	0.613
Q298N3	DpseGA20275	Q298N3	Q2LZ71	DNA-directed RNA polymerase III subunit RPC6.	Uncharacterized protein.	0.998
Q298N3	Q298X6	Q298N3	Q298X6	DNA-directed RNA polymerase III subunit RPC6.	DNA-directed RNA polymerase II subunit RPB2.	0.930
Q298N3	RpII215	Q298N3	Q29IN2	DNA-directed RNA polymerase III subunit RPC6.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.418
Q298X6	DpseGA12515	Q298X6	Q29JY4	DNA-directed RNA polymerase II subunit RPB2.	Uncharacterized protein.	0.947
Q298X6	DpseGA18324	Q298X6	Q29LI1	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.761
Q298X6	DpseGA20275	Q298X6	Q2LZ71	DNA-directed RNA polymerase II subunit RPB2.	Uncharacterized protein.	0.947
Q298X6	Q298N3	Q298X6	Q298N3	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerase III subunit RPC6.	0.930
Q298X6	RpII215	Q298X6	Q29IN2	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
RpII215	Q298N3	Q29IN2	Q298N3	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase III subunit RPC6.	0.418
RpII215	Q298X6	Q29IN2	Q298X6	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase II subunit RPB2.	0.999