47 items (Drosophila pseudoobscura) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DpseGA32151	Uncharacterized protein. (216 aa)
	A0A0R3NEW8	Heterogeneous nuclear ribonucleoprotein A1/A3. (371 aa)
	DpseGA25794	Uncharacterized protein, isoform L; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1963 aa)
	HP1A	Heterochromatin protein 1A, isoform B. (206 aa)
	A0A0R3NUE4	Uncharacterized protein. (1632 aa)
	DpseGA32181	Uncharacterized protein. (210 aa)
	DpseGA31240	Uncharacterized protein. (81 aa)
	DpseGA31287	Uncharacterized protein. (68 aa)
	DpseGA30749	Uncharacterized protein, isoform A. (486 aa)
	DpseGA25468	Uncharacterized protein. (263 aa)
	DpseGA25043	Uncharacterized protein. (202 aa)
	DpseGA26112	Uncharacterized protein. (205 aa)
	DpseGA22763	Non-specific serine/threonine protein kinase. (818 aa)
	DpseGA23070	Uncharacterized protein. (286 aa)
	DpseGA24044	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (1054 aa)
	DpseGA22996	Uncharacterized protein. (170 aa)
	DpseGA23554	Non-specific serine/threonine protein kinase. (1258 aa)
	DpseGA23520	Uncharacterized protein, isoform A. (1126 aa)
	DpseGA23928	Uncharacterized protein, isoform A. (1115 aa)
	DpseGA24014	Uncharacterized protein. (671 aa)
	B5DW86	Heterogeneous nuclear ribonucleoprotein A1/A3. (401 aa)
	B5DXS8	Set1/Ash2 histone methyltransferase complex subunit ASH2. (557 aa)
	B5E1L9	DNA excision repair protein ERCC-2. (769 aa)
	I5AP32	Uncharacterized protein, isoform C. (319 aa)
	Q290H4	Cyclin-dependent kinase 9. (402 aa)
	Q292N9	Transcription elongation factor SPT4. (116 aa)
	Q292S1	Transcription elongation factor SPT5. (1080 aa)
	Ssrp	FACT complex subunit Ssrp1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (727 aa)
	Q297H6	Uncharacterized protein, isoform C. (778 aa)
	Q297X4	ATP-dependent RNA helicase DDX5/DBP2. (738 aa)
	Q299C1	Nuclear pore complex protein Nup98-Nup96. (1981 aa)
	Q29A57	Nuclear factor erythroid 2, invertebrate. (1409 aa)
	Q29BI5	Protein transport protein SEC13. (356 aa)
	DpseGA13387	Uncharacterized protein. (478 aa)
	DpseGA21575	Uncharacterized protein. (328 aa)
	DpseGA11490	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1857 aa)
	DpseGA22166	Uncharacterized protein. (578 aa)
	DpseGA20099	Uncharacterized protein. (594 aa)
	DpseGA17728	Uncharacterized protein. (2566 aa)
	RpII215	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1889 aa)
	DpseGA14020	Uncharacterized protein. (308 aa)
	DpseGA20659	RPOLD domain-containing protein. (275 aa)
	DpseGA17649	Uncharacterized protein. (1943 aa)
	DpseGA18005	Uncharacterized protein, isoform A. (518 aa)
	DpseGA20468	Uncharacterized protein, isoform A. (1175 aa)
	DpseGA17962	Uncharacterized protein. (810 aa)
	DpseGA19492	Uncharacterized protein; Belongs to the cyclin family. (1137 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3NEW8	B5DW86	A0A0R3NEW8	B5DW86	Heterogeneous nuclear ribonucleoprotein A1/A3.	Heterogeneous nuclear ribonucleoprotein A1/A3.	0.928
A0A0R3NEW8	DpseGA20659	A0A0R3NEW8	Q29K78	Heterogeneous nuclear ribonucleoprotein A1/A3.	RPOLD domain-containing protein.	0.552
A0A0R3NEW8	RpII215	A0A0R3NEW8	Q29IN2	Heterogeneous nuclear ribonucleoprotein A1/A3.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.453
A0A0R3NUE4	DpseGA17962	A0A0R3NUE4	Q2M0L9	Uncharacterized protein.	Uncharacterized protein.	0.800
B5DW86	A0A0R3NEW8	B5DW86	A0A0R3NEW8	Heterogeneous nuclear ribonucleoprotein A1/A3.	Heterogeneous nuclear ribonucleoprotein A1/A3.	0.928
B5DW86	DpseGA20659	B5DW86	Q29K78	Heterogeneous nuclear ribonucleoprotein A1/A3.	RPOLD domain-containing protein.	0.497
B5DW86	I5AP32	B5DW86	I5AP32	Heterogeneous nuclear ribonucleoprotein A1/A3.	Uncharacterized protein, isoform C.	0.401
B5DW86	RpII215	B5DW86	Q29IN2	Heterogeneous nuclear ribonucleoprotein A1/A3.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.453
B5DXS8	DpseGA17728	B5DXS8	Q29I37	Set1/Ash2 histone methyltransferase complex subunit ASH2.	Uncharacterized protein.	0.948
B5DXS8	DpseGA17962	B5DXS8	Q2M0L9	Set1/Ash2 histone methyltransferase complex subunit ASH2.	Uncharacterized protein.	0.726
B5E1L9	DpseGA20468	B5E1L9	Q2LYK4	DNA excision repair protein ERCC-2.	Uncharacterized protein, isoform A.	0.665
B5E1L9	DpseGA20659	B5E1L9	Q29K78	DNA excision repair protein ERCC-2.	RPOLD domain-containing protein.	0.968
B5E1L9	RpII215	B5E1L9	Q29IN2	DNA excision repair protein ERCC-2.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.967
B5E1L9	Ssrp	B5E1L9	Q293F6	DNA excision repair protein ERCC-2.	FACT complex subunit Ssrp1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	0.646
DpseGA11490	DpseGA17649	Q29GF4	Q29KH0	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	Uncharacterized protein.	0.586
DpseGA11490	DpseGA17962	Q29GF4	Q2M0L9	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	Uncharacterized protein.	0.417
DpseGA11490	DpseGA19492	Q29GF4	Q2M0U3	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	Uncharacterized protein; Belongs to the cyclin family.	0.532
DpseGA11490	DpseGA20468	Q29GF4	Q2LYK4	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	Uncharacterized protein, isoform A.	0.677
DpseGA11490	DpseGA20659	Q29GF4	Q29K78	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	RPOLD domain-containing protein.	0.978
DpseGA11490	DpseGA23520	Q29GF4	B5DPP2	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	Uncharacterized protein, isoform A.	0.991