36 items (Drosophila pseudoobscura) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DpseGA14020	Uncharacterized protein. (308 aa)
	DpseGA25056	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (392 aa)
	DpseGA19989	Uncharacterized protein, isoform M. (2113 aa)
	Rpd3	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (554 aa)
	DpseGA27749	Uncharacterized protein. (1143 aa)
	DpseGA25761	Uncharacterized protein, isoform A. (387 aa)
	DpseGA25468	Uncharacterized protein. (263 aa)
	DpseGA25043	Uncharacterized protein. (202 aa)
	DpseGA26112	Uncharacterized protein. (205 aa)
	DpseGA22763	Non-specific serine/threonine protein kinase. (818 aa)
	DpseGA22377	FHA domain-containing protein. (379 aa)
	DpseGA23554	Non-specific serine/threonine protein kinase. (1258 aa)
	DpseGA23714	Chromo domain-containing protein. (936 aa)
	B5DY65	Microspherule protein 1. (388 aa)
	B5DYI5	Uncharacterized protein. (1189 aa)
	B5E0N3	Uncharacterized protein. (251 aa)
	B5E1L9	DNA excision repair protein ERCC-2. (769 aa)
	N6V975	Uncharacterized protein, isoform A. (396 aa)
	Hsp83	Heat shock protein 83; Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co- chaperones that modulate its substrate recognition, ATPase cycle and chaperone function. Required for piRNA biogenesis by facilitating loading of piRNAs into PIW [...] (717 aa)
	Q28YK9	Uncharacterized protein, isoform C. (1135 aa)
	Q291F6	Uncharacterized protein, isoform A. (278 aa)
	Q292N9	Transcription elongation factor SPT4. (116 aa)
	Q292S1	Transcription elongation factor SPT5. (1080 aa)
	Q293A3	Adh transcription factor 1. (280 aa)
	Ssrp	FACT complex subunit Ssrp1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (727 aa)
	Q295W9	KAT8 regulatory NSL complex subunit 1. (2211 aa)
	Q29A45	Uncharacterized protein, isoform D. (1731 aa)
	DpseGA13387	Uncharacterized protein. (478 aa)
	DpseGA10939	FHA domain-containing protein. (627 aa)
	DpseGA11490	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1857 aa)
	DpseGA22166	Uncharacterized protein. (578 aa)
	DpseGA19369	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (557 aa)
	DpseGA20561	Uncharacterized protein. (987 aa)
	DpseGA17662	Uncharacterized protein; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. (747 aa)
	DpseGA17649	Uncharacterized protein. (1943 aa)
	DpseGA15565	Uncharacterized protein, isoform B. (1821 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B5DY65	B5DYI5	B5DY65	B5DYI5	Microspherule protein 1.	Uncharacterized protein.	0.972
B5DY65	Q295W9	B5DY65	Q295W9	Microspherule protein 1.	KAT8 regulatory NSL complex subunit 1.	0.739
B5DYI5	B5DY65	B5DYI5	B5DY65	Uncharacterized protein.	Microspherule protein 1.	0.972
B5DYI5	DpseGA10939	B5DYI5	Q2LZW0	Uncharacterized protein.	FHA domain-containing protein.	0.972
B5DYI5	DpseGA15565	B5DYI5	Q29JH9	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.720
B5DYI5	DpseGA17649	B5DYI5	Q29KH0	Uncharacterized protein.	Uncharacterized protein.	0.777
B5DYI5	DpseGA17662	B5DYI5	Q29L25	Uncharacterized protein.	Uncharacterized protein; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily.	0.777
B5DYI5	DpseGA19369	B5DYI5	Q29I48	Uncharacterized protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.937
B5DYI5	DpseGA22377	B5DYI5	B5DMY7	Uncharacterized protein.	FHA domain-containing protein.	0.972
B5DYI5	DpseGA23714	B5DYI5	B5DQQ8	Uncharacterized protein.	Chromo domain-containing protein.	0.412
B5DYI5	DpseGA25056	B5DYI5	A0A0R3NTW4	Uncharacterized protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.937
B5DYI5	DpseGA25761	B5DYI5	B5DID2	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.972
B5DYI5	Q28YK9	B5DYI5	Q28YK9	Uncharacterized protein.	Uncharacterized protein, isoform C.	0.785
B5DYI5	Q295W9	B5DYI5	Q295W9	Uncharacterized protein.	KAT8 regulatory NSL complex subunit 1.	0.649
B5DYI5	Rpd3	B5DYI5	A0A0R3P6D5	Uncharacterized protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.998
B5E1L9	Ssrp	B5E1L9	Q293F6	DNA excision repair protein ERCC-2.	FACT complex subunit Ssrp1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	0.646
DpseGA10939	B5DYI5	Q2LZW0	B5DYI5	FHA domain-containing protein.	Uncharacterized protein.	0.972
DpseGA10939	Q295W9	Q2LZW0	Q295W9	FHA domain-containing protein.	KAT8 regulatory NSL complex subunit 1.	0.739
DpseGA11490	DpseGA17649	Q29GF4	Q29KH0	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	Uncharacterized protein.	0.586
DpseGA11490	Q292N9	Q29GF4	Q292N9	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	Transcription elongation factor SPT4.	0.978