(31 nodes) Viral process network (Drosophila pseudoobscura)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DpseGA29225	Uncharacterized protein. (207 aa)
	DpseGA29085	Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family. (845 aa)
	DpseGA22841	RING-type domain-containing protein. (112 aa)
	DpseGA26078	Uncharacterized protein. (204 aa)
	B5DVK9	Exocyst complex component 5. (709 aa)
	B5DY77	Uncharacterized protein. (118 aa)
	Q28XJ2	Ras-related protein Rab-3C. (220 aa)
	Q292Z1	Uncharacterized protein, isoform A. (213 aa)
	Q293J9	Natural resistance-associated macrophage protein 2. (647 aa)
	Q296V6	Ras-related protein Rab-11A. (214 aa)
	DpseGA10714	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (180 aa)
	DpseGA21885	Uncharacterized protein. (200 aa)
	DpseGA11682	AP complex subunit beta. (924 aa)
	DpseGA20171	Uncharacterized protein, isoform A. (365 aa)
	DpseGA19899	Uncharacterized protein, isoform A; Belongs to the AAA ATPase family. (441 aa)
	DpseGA18036	Uncharacterized protein, isoform A. (243 aa)
	DpseGA18414	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. (182 aa)
	DpseGA23499	Uncharacterized protein, isoform A. (207 aa)
	DpseGA23949	Uncharacterized protein, isoform A. (417 aa)
	DpseGA25617	RING-type domain-containing protein. (850 aa)
	DpseGA28117	GED domain-containing protein. (167 aa)
	DpseGA25765	Uncharacterized protein. (296 aa)
	DpseGA19474	Uncharacterized protein. (228 aa)
	DpseGA21542	Uncharacterized protein, isoform B. (230 aa)
	DpseGA13508	Uncharacterized protein, isoform A; Belongs to the cullin family. (756 aa)
	DpseGA17598	Uncharacterized protein, isoform A. (218 aa)
	DpseGA20111	Uncharacterized protein, isoform B. (318 aa)
	A0A0R3NUA3	Charged multivesicular body protein 4. (232 aa)
	DpseGA25944	Uncharacterized protein. (186 aa)
	A0A0R3NN99	Uncharacterized protein, isoform A. (1430 aa)
	DpseGA27687	Uncharacterized protein, isoform B; Belongs to the SKP1 family. (139 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3NN99	B5DVK9	A0A0R3NN99	B5DVK9	Uncharacterized protein, isoform A.	Exocyst complex component 5.	0.998
A0A0R3NN99	DpseGA23499	A0A0R3NN99	B5DPR3	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform A.	0.740
A0A0R3NN99	DpseGA26078	A0A0R3NN99	B5DN66	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.740
A0A0R3NN99	Q296V6	A0A0R3NN99	Q296V6	Uncharacterized protein, isoform A.	Ras-related protein Rab-11A.	0.863
A0A0R3NUA3	DpseGA19474	A0A0R3NUA3	Q2M0U1	Charged multivesicular body protein 4.	Uncharacterized protein.	0.981
A0A0R3NUA3	DpseGA19899	A0A0R3NUA3	Q29H77	Charged multivesicular body protein 4.	Uncharacterized protein, isoform A; Belongs to the AAA ATPase family.	0.995
A0A0R3NUA3	DpseGA20171	A0A0R3NUA3	Q29H70	Charged multivesicular body protein 4.	Uncharacterized protein, isoform A.	0.736
A0A0R3NUA3	DpseGA25617	A0A0R3NUA3	B5DSB0	Charged multivesicular body protein 4.	RING-type domain-containing protein.	0.546
B5DVK9	A0A0R3NN99	B5DVK9	A0A0R3NN99	Exocyst complex component 5.	Uncharacterized protein, isoform A.	0.998
B5DVK9	DpseGA23499	B5DVK9	B5DPR3	Exocyst complex component 5.	Uncharacterized protein, isoform A.	0.699
B5DVK9	DpseGA26078	B5DVK9	B5DN66	Exocyst complex component 5.	Uncharacterized protein.	0.699
B5DVK9	Q296V6	B5DVK9	Q296V6	Exocyst complex component 5.	Ras-related protein Rab-11A.	0.864
B5DY77	DpseGA13508	B5DY77	Q29P05	Uncharacterized protein.	Uncharacterized protein, isoform A; Belongs to the cullin family.	0.994
B5DY77	DpseGA22841	B5DY77	B5DKH1	Uncharacterized protein.	RING-type domain-containing protein.	0.898
B5DY77	DpseGA27687	B5DY77	A0A0R3P1Q1	Uncharacterized protein.	Uncharacterized protein, isoform B; Belongs to the SKP1 family.	0.999
DpseGA10714	DpseGA11682	Q29CQ9	Q29H04	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	AP complex subunit beta.	0.797
DpseGA10714	DpseGA28117	Q29CQ9	B5DSK9	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	GED domain-containing protein.	0.421
DpseGA10714	Q296V6	Q29CQ9	Q296V6	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Ras-related protein Rab-11A.	0.550
DpseGA11682	DpseGA10714	Q29H04	Q29CQ9	AP complex subunit beta.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.797
DpseGA11682	DpseGA17598	Q29H04	Q29MK6	AP complex subunit beta.	Uncharacterized protein, isoform A.	0.410