10 items (Drosophila pseudoobscura) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DpseGA18235	Uncharacterized protein. (216 aa)
	DpseGA18660	BHLH domain-containing protein. (678 aa)
	Q298L6	MRNA m6A methyltransferase catalytic subunit. (612 aa)
	Q297P2	Uncharacterized protein, isoform B. (557 aa)
	DpseGA10202	RING-type domain-containing protein. (433 aa)
	Q28Y93	Mediator of RNA polymerase II transcription subunit 29. (189 aa)
	Q28YH1	Uncharacterized protein. (359 aa)
	DpseGA28355	Uncharacterized protein. (197 aa)
	DpseGA22653	Uncharacterized protein, isoform A. (377 aa)
	DpseGA20607	Uncharacterized protein; Belongs to the MT-A70-like family. (445 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DpseGA10202	DpseGA20607	Q29PG8	Q29MN2	RING-type domain-containing protein.	Uncharacterized protein; Belongs to the MT-A70-like family.	0.680
DpseGA10202	Q298L6	Q29PG8	Q298L6	RING-type domain-containing protein.	MRNA m6A methyltransferase catalytic subunit.	0.677
DpseGA18235	DpseGA22653	Q29J33	B5DLD4	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.862
DpseGA20607	DpseGA10202	Q29MN2	Q29PG8	Uncharacterized protein; Belongs to the MT-A70-like family.	RING-type domain-containing protein.	0.680
DpseGA20607	Q298L6	Q29MN2	Q298L6	Uncharacterized protein; Belongs to the MT-A70-like family.	MRNA m6A methyltransferase catalytic subunit.	0.996
DpseGA22653	DpseGA18235	B5DLD4	Q29J33	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.862
DpseGA22653	DpseGA28355	B5DLD4	B5DR46	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.857
DpseGA22653	Q297P2	B5DLD4	Q297P2	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform B.	0.551
DpseGA28355	DpseGA22653	B5DR46	B5DLD4	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.857
DpseGA28355	Q297P2	B5DR46	Q297P2	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.628
Q297P2	DpseGA22653	Q297P2	B5DLD4	Uncharacterized protein, isoform B.	Uncharacterized protein, isoform A.	0.551
Q297P2	DpseGA28355	Q297P2	B5DR46	Uncharacterized protein, isoform B.	Uncharacterized protein.	0.628
Q298L6	DpseGA10202	Q298L6	Q29PG8	MRNA m6A methyltransferase catalytic subunit.	RING-type domain-containing protein.	0.677
Q298L6	DpseGA20607	Q298L6	Q29MN2	MRNA m6A methyltransferase catalytic subunit.	Uncharacterized protein; Belongs to the MT-A70-like family.	0.996