(29 nodes) Clathrin binding network (Drosophila pseudoobscura)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DpseGA19975	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (222 aa)
	A0A0R3NGX8	annotation not available (157 aa)
	A0A0R3NHC8	annotation not available (1172 aa)
	A0A0R3NRL3	annotation not available (814 aa)
	DpseGA17503	Uncharacterized protein, isoform D. (575 aa)
	DpseGA21142	Uncharacterized protein, isoform C. (868 aa)
	DpseGA25116	Uncharacterized protein. (799 aa)
	DpseGA22666	Uncharacterized protein, isoform C. (2872 aa)
	DpseGA23086	Uncharacterized protein; Belongs to the Stoned B family. (1333 aa)
	DpseGA28126	Uncharacterized protein, isoform A. (772 aa)
	DpseGA26124	AP-1 complex subunit gamma. (965 aa)
	DpseGA23562	Uncharacterized protein. (1168 aa)
	DpseGA22513	Uncharacterized protein. (283 aa)
	DpseGA22551	Uncharacterized protein. (88 aa)
	B5DW96	Uncharacterized protein, isoform A. (516 aa)
	B5DYN6	Uncharacterized protein, isoform C. (1428 aa)
	Q295D0	Cyclin G-associated kinase. (1192 aa)
	Q295J6	AP-1 complex subunit mu. (426 aa)
	Q298U5	AP-2 complex subunit mu-1. (437 aa)
	Q29B05	AP-2 complex subunit sigma-1. (142 aa)
	DpseGA21476	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1584 aa)
	DpseGA11682	AP complex subunit beta. (924 aa)
	DpseGA15580	Uncharacterized protein. (675 aa)
	DpseGA11662	Uncharacterized protein. (378 aa)
	DpseGA10439	Uncharacterized protein. (772 aa)
	DpseGA16224	Uncharacterized protein. (473 aa)
	DpseGA18970	Uncharacterized protein, isoform B. (491 aa)
	alpha-Adaptin	AP-2 complex subunit alpha; Adaptins are components of the adapter complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. Alpha adaptin is a subunit of the plasma membrane adapter (By similarity). (939 aa)
	DpseGA15723	Uncharacterized protein, isoform A. (610 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3NGX8	B5DYN6	A0A0R3NGX8	B5DYN6	annotation not available	Uncharacterized protein, isoform C.	0.576
A0A0R3NGX8	DpseGA11682	A0A0R3NGX8	Q29H04	annotation not available	AP complex subunit beta.	0.960
A0A0R3NGX8	DpseGA19975	A0A0R3NGX8	Q2M0W4	annotation not available	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.673
A0A0R3NGX8	DpseGA21476	A0A0R3NGX8	Q29CS2	annotation not available	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.613
A0A0R3NGX8	DpseGA22551	A0A0R3NGX8	B5DSP7	annotation not available	Uncharacterized protein.	0.613
A0A0R3NGX8	DpseGA26124	A0A0R3NGX8	B5DN54	annotation not available	AP-1 complex subunit gamma.	0.969
A0A0R3NGX8	Q295D0	A0A0R3NGX8	Q295D0	annotation not available	Cyclin G-associated kinase.	0.992
A0A0R3NGX8	Q295J6	A0A0R3NGX8	Q295J6	annotation not available	AP-1 complex subunit mu.	0.972
A0A0R3NGX8	alpha-Adaptin	A0A0R3NGX8	Q29N38	annotation not available	AP-2 complex subunit alpha; Adaptins are components of the adapter complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. Alpha adaptin is a subunit of the plasma membrane adapter (By similarity).	0.812
A0A0R3NHC8	Q295J6	A0A0R3NHC8	Q295J6	annotation not available	AP-1 complex subunit mu.	0.564
A0A0R3NRL3	B5DW96	A0A0R3NRL3	B5DW96	annotation not available	Uncharacterized protein, isoform A.	0.786
A0A0R3NRL3	B5DYN6	A0A0R3NRL3	B5DYN6	annotation not available	Uncharacterized protein, isoform C.	0.721
A0A0R3NRL3	DpseGA10439	A0A0R3NRL3	Q29IR3	annotation not available	Uncharacterized protein.	0.497
A0A0R3NRL3	DpseGA11682	A0A0R3NRL3	Q29H04	annotation not available	AP complex subunit beta.	0.747
A0A0R3NRL3	DpseGA15723	A0A0R3NRL3	Q2M189	annotation not available	Uncharacterized protein, isoform A.	0.520
A0A0R3NRL3	DpseGA16224	A0A0R3NRL3	Q29KW1	annotation not available	Uncharacterized protein.	0.779
A0A0R3NRL3	DpseGA18970	A0A0R3NRL3	Q29LC2	annotation not available	Uncharacterized protein, isoform B.	0.413
A0A0R3NRL3	DpseGA19975	A0A0R3NRL3	Q2M0W4	annotation not available	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.836
A0A0R3NRL3	DpseGA21142	A0A0R3NRL3	A0A0R3P7J1	annotation not available	Uncharacterized protein, isoform C.	0.873
A0A0R3NRL3	DpseGA21476	A0A0R3NRL3	Q29CS2	annotation not available	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.830