18 items (Drosophila pseudoobscura) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DpseGA27846	Uncharacterized protein, isoform B. (92 aa)
	Q29B09	Negative elongation factor A. (1271 aa)
	Q292N9	Transcription elongation factor SPT4. (116 aa)
	DpseGA27855	Uncharacterized protein, isoform A. (92 aa)
	Q299U4	Uncharacterized protein. (341 aa)
	Q292S1	Transcription elongation factor SPT5. (1080 aa)
	DpseGA23201	HTH La-type RNA-binding domain-containing protein. (167 aa)
	DpseGA19284	Uncharacterized protein, isoform B. (287 aa)
	DpseGA31582	Uncharacterized protein, isoform B. (92 aa)
	DpseGA27853	HTH La-type RNA-binding domain-containing protein. (92 aa)
	DpseGA16935	USP domain-containing protein; Belongs to the peptidase C19 family. (1249 aa)
	DpseGA14445	WD_REPEATS_REGION domain-containing protein. (317 aa)
	DpseGA19452	Uncharacterized protein. (1439 aa)
	DpseGA17514	Uncharacterized protein. (611 aa)
	DpseGA11366	Uncharacterized protein, isoform A. (626 aa)
	DpseGA17103	Uncharacterized protein. (590 aa)
	DpseGA22166	Uncharacterized protein. (578 aa)
	DpseGA31470	HTH La-type RNA-binding domain-containing protein. (148 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DpseGA11366	DpseGA17103	Q29HX0	Q29G99	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.402
DpseGA14445	DpseGA19452	Q29NY8	Q29IM8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.901
DpseGA17103	DpseGA11366	Q29G99	Q29HX0	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.402
DpseGA17103	DpseGA19284	Q29G99	A0A0R3P7I6	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.991
DpseGA17103	DpseGA22166	Q29G99	Q29GI5	Uncharacterized protein.	Uncharacterized protein.	0.995
DpseGA17103	DpseGA23201	Q29G99	B5DTJ4	Uncharacterized protein.	HTH La-type RNA-binding domain-containing protein.	0.402
DpseGA17103	DpseGA27846	Q29G99	A0A0R3NWC1	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.402
DpseGA17103	DpseGA27853	Q29G99	A0A0R3P2V3	Uncharacterized protein.	HTH La-type RNA-binding domain-containing protein.	0.402
DpseGA17103	DpseGA27855	Q29G99	B5DTP5	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.402
DpseGA17103	DpseGA31470	Q29G99	A0A0R3NWQ7	Uncharacterized protein.	HTH La-type RNA-binding domain-containing protein.	0.402
DpseGA17103	DpseGA31582	Q29G99	A0A0R3P2X7	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.402
DpseGA17103	Q292N9	Q29G99	Q292N9	Uncharacterized protein.	Transcription elongation factor SPT4.	0.942
DpseGA17103	Q292S1	Q29G99	Q292S1	Uncharacterized protein.	Transcription elongation factor SPT5.	0.972
DpseGA17103	Q29B09	Q29G99	Q29B09	Uncharacterized protein.	Negative elongation factor A.	0.991
DpseGA19284	DpseGA17103	A0A0R3P7I6	Q29G99	Uncharacterized protein, isoform B.	Uncharacterized protein.	0.991
DpseGA19284	DpseGA22166	A0A0R3P7I6	Q29GI5	Uncharacterized protein, isoform B.	Uncharacterized protein.	0.991
DpseGA19284	Q292N9	A0A0R3P7I6	Q292N9	Uncharacterized protein, isoform B.	Transcription elongation factor SPT4.	0.940
DpseGA19284	Q292S1	A0A0R3P7I6	Q292S1	Uncharacterized protein, isoform B.	Transcription elongation factor SPT5.	0.945
DpseGA19284	Q29B09	A0A0R3P7I6	Q29B09	Uncharacterized protein, isoform B.	Negative elongation factor A.	0.985
DpseGA19452	DpseGA14445	Q29IM8	Q29NY8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.901