(55 nodes) Regulation of tube size network (Drosophila pseudoobscura)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DpseGA28739	Uncharacterized protein. (269 aa)
	DpseGA27946	Uncharacterized protein. (598 aa)
	DpseGA22551	Uncharacterized protein. (88 aa)
	DpseGA26057	Uncharacterized protein, isoform A. (3586 aa)
	DpseGA25950	Uncharacterized protein. (1279 aa)
	DpseGA19887	Uncharacterized protein, isoform D. (1284 aa)
	DpseGA17599	Uncharacterized protein, isoform D. (891 aa)
	DpseGA19056	IRS-type PTB domain-containing protein. (272 aa)
	A0A0R3NVE4	Cadherin EGF LAG seven-pass G-type receptor 1. (3626 aa)
	DpseGA21652	Uncharacterized protein, isoform A. (323 aa)
	DpseGA13266	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (530 aa)
	DpseGA14300	Uncharacterized protein. (238 aa)
	DpseGA17546	Uncharacterized protein, isoform A. (174 aa)
	DpseGA14061	Uncharacterized protein, isoform A. (1309 aa)
	DpseGA21533	Uncharacterized protein, isoform A. (419 aa)
	DpseGA21299	Chitin-binding type-2 domain-containing protein. (528 aa)
	DpseGA16758	Chitin-binding type-2 domain-containing protein. (541 aa)
	DpseGA21476	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1584 aa)
	Q29BL1	Uncharacterized protein. (257 aa)
	Q297X8	Uncharacterized protein, isoform A. (259 aa)
	Dpse_ttk	Tramtrack, isoform F. (829 aa)
	Q294W5	Uncharacterized protein. (169 aa)
	Q293G9	Uncharacterized protein. (264 aa)
	Q292D9	Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1. (1997 aa)
	Q290V4	Uncharacterized protein. (808 aa)
	Q28Z97	Uncharacterized protein, isoform H. (1708 aa)
	Q28Z95	Uncharacterized protein. (731 aa)
	Q28YU1	Four-jointed box protein 1. (638 aa)
	Q28Y34	Uncharacterized protein. (365 aa)
	Q28XM9	Uncharacterized protein, isoform A. (1439 aa)
	Q28XL6	Matrix metalloproteinase-14 (membrane-inserted). (610 aa)
	Q28X54	Uncharacterized protein, isoform B. (1098 aa)
	Dpse_EcR	Ecdysone receptor. (700 aa)
	N6VFR9	Transcription factor CP2 and related proteins. (1360 aa)
	I5APC8	Uncharacterized protein, isoform C. (1613 aa)
	I5ANS6	Sodium/potassium-transporting ATPase subunit alpha. (1041 aa)
	I5ANC2	Uncharacterized protein. (693 aa)
	B5E1M6	Uncharacterized protein, isoform A. (899 aa)
	B5DZ84	Uncharacterized protein, isoform A. (205 aa)
	B5DVG8	Uncharacterized protein. (2876 aa)
	DpseGA21861	Uncharacterized protein, isoform A. (521 aa)
	DpseGA19312	Uncharacterized protein. (159 aa)
	DpseGA10446	Uncharacterized protein. (247 aa)
	DpseGA14615	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (619 aa)
	DpseGA17399	Uncharacterized protein, isoform B. (5256 aa)
	DpseGA15471	Uncharacterized protein. (153 aa)
	DpseGA17775	Uncharacterized protein. (3108 aa)
	DpseGA14397	Uncharacterized protein. (151 aa)
	DpseGA21703	Uncharacterized protein, isoform A; Belongs to the MAGUK family. (644 aa)
	Tep6	Thioester-containing protein 6. (1773 aa)
	DpseGA17762	Uncharacterized protein, isoform A. (949 aa)
	DpseGA11633	Uncharacterized protein. (853 aa)
	DpseGA13238	Uncharacterized protein. (256 aa)
	DpseGA12667	Uncharacterized protein. (154 aa)
	DpseGA14904	Uncharacterized protein. (618 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3NVE4	DpseGA14615	A0A0R3NVE4	Q2LZT5	Cadherin EGF LAG seven-pass G-type receptor 1.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.717
A0A0R3NVE4	DpseGA14904	A0A0R3NVE4	Q29H20	Cadherin EGF LAG seven-pass G-type receptor 1.	Uncharacterized protein.	0.685
B5DZ84	DpseGA14904	B5DZ84	Q29H20	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.736
B5DZ84	DpseGA17546	B5DZ84	Q29GG1	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform A.	0.583
B5DZ84	DpseGA21476	B5DZ84	Q29CS2	Uncharacterized protein, isoform A.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.504
B5DZ84	DpseGA22551	B5DZ84	B5DSP7	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.504
B5DZ84	Q28XM9	B5DZ84	Q28XM9	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform A.	0.764
B5DZ84	Q292D9	B5DZ84	Q292D9	Uncharacterized protein, isoform A.	Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1.	0.417
B5E1M6	Dpse_EcR	B5E1M6	Q28WY6	Uncharacterized protein, isoform A.	Ecdysone receptor.	0.900
B5E1M6	Q28XM9	B5E1M6	Q28XM9	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform A.	0.436
DpseGA10446	DpseGA14061	Q2LZM4	Q29FM1	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.542
DpseGA10446	DpseGA14397	Q2LZM4	Q29M72	Uncharacterized protein.	Uncharacterized protein.	0.473
DpseGA10446	DpseGA19887	Q2LZM4	A0A0R3P3K9	Uncharacterized protein.	Uncharacterized protein, isoform D.	0.639
DpseGA10446	I5ANS6	Q2LZM4	I5ANS6	Uncharacterized protein.	Sodium/potassium-transporting ATPase subunit alpha.	0.405
DpseGA10446	Q28Y34	Q2LZM4	Q28Y34	Uncharacterized protein.	Uncharacterized protein.	0.613
DpseGA12667	DpseGA27946	Q29HJ3	B5DU90	Uncharacterized protein.	Uncharacterized protein.	0.449
DpseGA12667	DpseGA28739	Q29HJ3	B5DUG9	Uncharacterized protein.	Uncharacterized protein.	0.477
DpseGA12667	I5ANC2	Q29HJ3	I5ANC2	Uncharacterized protein.	Uncharacterized protein.	0.454
DpseGA12667	Q28Y34	Q29HJ3	Q28Y34	Uncharacterized protein.	Uncharacterized protein.	0.416
DpseGA13238	DpseGA14061	Q29J10	Q29FM1	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.494