(25 nodes) Positive regulation of multicellular organism growth network (Drosophila pseudoobscura)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DpseGA20322	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (616 aa)
	A0A0R3NKT4	Uncharacterized protein, isoform E. (646 aa)
	DpseGA11107	Uncharacterized protein, isoform B. (748 aa)
	DpseGA19056	IRS-type PTB domain-containing protein. (272 aa)
	DpseGA19279	Uncharacterized protein, isoform B. (438 aa)
	DpseGA28399	Uncharacterized protein, isoform D. (915 aa)
	DpseGA22847	Uncharacterized protein. (156 aa)
	DpseGA22933	Uncharacterized protein. (1602 aa)
	DpseGA23412	Uncharacterized protein, isoform A; Belongs to the fatty acid desaturase type 1 family. (379 aa)
	DpseGA22236	Uncharacterized protein. (122 aa)
	B5DVF9	Synaptotagmin-like protein. (4047 aa)
	B5DX59	Uncharacterized protein. (2795 aa)
	B5DYA7	Ras association domain-containing protein 2/4. (822 aa)
	B5DYR5	Insulin-like growth factor 1 receptor. (2293 aa)
	B5E0Z6	Uncharacterized protein. (122 aa)
	Tctp	Translationally-controlled tumor protein homolog; Involved in calcium binding and microtubule stabilization. Belongs to the TCTP family. (172 aa)
	Q294V1	RAC serine/threonine-protein kinase. (530 aa)
	Q298Q1	MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5. (565 aa)
	Q29AR5	Uncharacterized protein, isoform A. (357 aa)
	Dpse_Desat1	Stearoyl-CoA desaturase (Delta-9 desaturase). (383 aa)
	ey	Ey, isoform A. (896 aa)
	DpseGA10484	Protein kinase domain-containing protein. (224 aa)
	DpseGA11504	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (338 aa)
	DpseGA10565	BHLH domain-containing protein. (734 aa)
	DpseGA20320	Mitogen-activated protein kinase. (365 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B5DX59	Q294V1	B5DX59	Q294V1	Uncharacterized protein.	RAC serine/threonine-protein kinase.	0.549
B5DYR5	DpseGA19056	B5DYR5	A0A0R3NWK0	Insulin-like growth factor 1 receptor.	IRS-type PTB domain-containing protein.	0.998
B5DYR5	DpseGA22847	B5DYR5	B5DKG0	Insulin-like growth factor 1 receptor.	Uncharacterized protein.	0.957
B5DYR5	DpseGA28399	B5DYR5	A0A0R3P909	Insulin-like growth factor 1 receptor.	Uncharacterized protein, isoform D.	0.497
DpseGA10565	Q294V1	Q29IE0	Q294V1	BHLH domain-containing protein.	RAC serine/threonine-protein kinase.	0.460
DpseGA11504	DpseGA20320	Q29IB7	Q29K65	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase.	0.990
DpseGA11504	Q294V1	Q29IB7	Q294V1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	RAC serine/threonine-protein kinase.	0.462
DpseGA19056	B5DYR5	A0A0R3NWK0	B5DYR5	IRS-type PTB domain-containing protein.	Insulin-like growth factor 1 receptor.	0.998
DpseGA19056	DpseGA22847	A0A0R3NWK0	B5DKG0	IRS-type PTB domain-containing protein.	Uncharacterized protein.	0.439
DpseGA19056	DpseGA28399	A0A0R3NWK0	A0A0R3P909	IRS-type PTB domain-containing protein.	Uncharacterized protein, isoform D.	0.435
DpseGA19056	Q294V1	A0A0R3NWK0	Q294V1	IRS-type PTB domain-containing protein.	RAC serine/threonine-protein kinase.	0.667
DpseGA19279	DpseGA22847	A0A0R3P1N6	B5DKG0	Uncharacterized protein, isoform B.	Uncharacterized protein.	0.410
DpseGA20320	DpseGA11504	Q29K65	Q29IB7	Mitogen-activated protein kinase.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.990
DpseGA20320	DpseGA28399	Q29K65	A0A0R3P909	Mitogen-activated protein kinase.	Uncharacterized protein, isoform D.	0.627
DpseGA20320	Q294V1	Q29K65	Q294V1	Mitogen-activated protein kinase.	RAC serine/threonine-protein kinase.	0.407
DpseGA22847	B5DYR5	B5DKG0	B5DYR5	Uncharacterized protein.	Insulin-like growth factor 1 receptor.	0.957
DpseGA22847	DpseGA19056	B5DKG0	A0A0R3NWK0	Uncharacterized protein.	IRS-type PTB domain-containing protein.	0.439
DpseGA22847	DpseGA19279	B5DKG0	A0A0R3P1N6	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.410
DpseGA28399	B5DYR5	A0A0R3P909	B5DYR5	Uncharacterized protein, isoform D.	Insulin-like growth factor 1 receptor.	0.497
DpseGA28399	DpseGA19056	A0A0R3P909	A0A0R3NWK0	Uncharacterized protein, isoform D.	IRS-type PTB domain-containing protein.	0.435