(49 nodes) Positive regulation of innate immune response network (Drosophila pseudoobscura)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N6VEY5	Uncharacterized protein, isoform G. (658 aa)
	A0A0R3NIQ6	Uncharacterized protein, isoform A. (1360 aa)
	A0A0R3NPI3	Uncharacterized protein, isoform A. (1266 aa)
	A0A0R3NUI6	Uncharacterized protein, isoform A. (449 aa)
	DpseGA21462	Uncharacterized protein. (163 aa)
	DpseGA22837	Uncharacterized protein, isoform B. (212 aa)
	DpseGA20175	Uncharacterized protein, isoform B. (595 aa)
	DpseGA27294	Uncharacterized protein, isoform B. (287 aa)
	DpseGA27189	Uncharacterized protein, isoform A. (386 aa)
	DpseGA22930	Uncharacterized protein, isoform A. (1694 aa)
	DpseGA23522	Uncharacterized protein, isoform A. (668 aa)
	DpseGA23138	Uncharacterized protein. (136 aa)
	DpseGA28732	Uncharacterized protein. (207 aa)
	DpseGA23242	Uncharacterized protein. (2183 aa)
	B5DW08	Uncharacterized protein. (191 aa)
	B5DW97	Uncharacterized protein. (547 aa)
	B5DWB5	Uncharacterized protein. (383 aa)
	B5DX82	Uncharacterized protein, isoform B. (800 aa)
	B5E0D1	Uncharacterized protein, isoform C. (713 aa)
	I5AN97	Vacuolar ATPase assembly integral membrane protein VMA21. (123 aa)
	Q293L2	Uncharacterized protein, isoform A. (751 aa)
	Q293W0	Uncharacterized protein, isoform A. (800 aa)
	Q294I3	Nuclear factor NF-kappa-B p105 subunit. (968 aa)
	Q294N1	Uncharacterized protein. (383 aa)
	Q297J7	Modular serine protease. (629 aa)
	Q297K6	Histone acetyltransferase 1. (444 aa)
	Q298W1	Tudor domain-containing protein 1/4/6/7. (918 aa)
	Q29AM8	25S rRNA (cytosine2278-C5)-methyltransferase. (433 aa)
	Q29CH0	Solute carrier family 25, member 42. (391 aa)
	DpseGA19422	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (377 aa)
	DpseGA20172	Mab-21 domain-containing protein. (351 aa)
	DpseGA18590	GH16 domain-containing protein. (496 aa)
	DpseGA12022	Uncharacterized protein. (135 aa)
	DpseGA18185	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (167 aa)
	DpseGA19213	Uncharacterized protein. (833 aa)
	Mt2	Mt2; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (347 aa)
	DpseGA12522	Uncharacterized protein. (362 aa)
	DpseGA19382	Uncharacterized protein, isoform A; Belongs to the argonaute family. (851 aa)
	DpseGA12683	Uncharacterized protein. (156 aa)
	DpseGA18943	Uncharacterized protein, isoform A; Belongs to the peptidase M16 family. (1034 aa)
	DpseGA19936	GH16 domain-containing protein. (499 aa)
	DpseGA17986	GH16 domain-containing protein. (464 aa)
	DpseGA21176	Uncharacterized protein. (199 aa)
	Q28XB1	Uncharacterized protein, isoform B. (336 aa)
	Q28YE1	Uncharacterized protein. (1387 aa)
	Q28YE4	Uncharacterized protein. (1445 aa)
	Q28YS4	Uncharacterized protein. (274 aa)
	Q28ZP7	DNA methyltransferase 1-associated protein 1. (433 aa)
	Q291A3	Uncharacterized protein, isoform A. (1726 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3NUI6	Q28YS4	A0A0R3NUI6	Q28YS4	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.544
B5DX82	Q293L2	B5DX82	Q293L2	Uncharacterized protein, isoform B.	Uncharacterized protein, isoform A.	0.838
DpseGA18590	Q297J7	Q29DZ2	Q297J7	GH16 domain-containing protein.	Modular serine protease.	0.946
DpseGA19382	Q291A3	Q29P29	Q291A3	Uncharacterized protein, isoform A; Belongs to the argonaute family.	Uncharacterized protein, isoform A.	0.497
DpseGA19382	Q298W1	Q29P29	Q298W1	Uncharacterized protein, isoform A; Belongs to the argonaute family.	Tudor domain-containing protein 1/4/6/7.	0.782
DpseGA19936	Q28YS4	Q2LYY0	Q28YS4	GH16 domain-containing protein.	Uncharacterized protein.	0.449
DpseGA19936	Q297J7	Q2LYY0	Q297J7	GH16 domain-containing protein.	Modular serine protease.	0.946
DpseGA20172	Q28XB1	Q29DS7	Q28XB1	Mab-21 domain-containing protein.	Uncharacterized protein, isoform B.	0.604
DpseGA21462	DpseGA22837	A0A0R3NWU8	A0A0R3NXX5	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.908
DpseGA21462	Q28YS4	A0A0R3NWU8	Q28YS4	Uncharacterized protein.	Uncharacterized protein.	0.947
DpseGA22837	DpseGA21462	A0A0R3NXX5	A0A0R3NWU8	Uncharacterized protein, isoform B.	Uncharacterized protein.	0.908
DpseGA22837	Q28YS4	A0A0R3NXX5	Q28YS4	Uncharacterized protein, isoform B.	Uncharacterized protein.	0.947
DpseGA27294	N6VEY5	B5DM46	N6VEY5	Uncharacterized protein, isoform B.	Uncharacterized protein, isoform G.	0.906
I5AN97	Mt2	I5AN97	Q29NK7	Vacuolar ATPase assembly integral membrane protein VMA21.	Mt2; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.518
Mt2	I5AN97	Q29NK7	I5AN97	Mt2; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Vacuolar ATPase assembly integral membrane protein VMA21.	0.518
Mt2	Q291A3	Q29NK7	Q291A3	Mt2; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Uncharacterized protein, isoform A.	0.459
Mt2	Q29AM8	Q29NK7	Q29AM8	Mt2; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	25S rRNA (cytosine2278-C5)-methyltransferase.	0.518
N6VEY5	DpseGA27294	N6VEY5	B5DM46	Uncharacterized protein, isoform G.	Uncharacterized protein, isoform B.	0.906
Q28XB1	DpseGA20172	Q28XB1	Q29DS7	Uncharacterized protein, isoform B.	Mab-21 domain-containing protein.	0.604
Q28YS4	A0A0R3NUI6	Q28YS4	A0A0R3NUI6	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.544