(10 nodes) Cell-cell junction maintenance network (Drosophila pseudoobscura)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I5APB1	Uncharacterized protein, isoform C. (1114 aa)
	A0A0R3NI42	Uncharacterized protein, isoform D. (2255 aa)
	DpseGA17775	Uncharacterized protein. (3108 aa)
	DpseGA30789	Uncharacterized protein. (501 aa)
	DpseGA32194	Uncharacterized protein. (287 aa)
	DpseGA11344	Uncharacterized protein, isoform B. (880 aa)
	DpseGA28117	GED domain-containing protein. (167 aa)
	B5DZ84	Uncharacterized protein, isoform A. (205 aa)
	I5ANW9	Uncharacterized protein, isoform G. (1285 aa)
	Q296V6	Ras-related protein Rab-11A. (214 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3NI42	DpseGA11344	A0A0R3NI42	A0A0R3P3U6	Uncharacterized protein, isoform D.	Uncharacterized protein, isoform B.	0.894
B5DZ84	DpseGA30789	B5DZ84	A0A0R3P1H1	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.567
B5DZ84	DpseGA32194	B5DZ84	A0A0R3P269	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.567
B5DZ84	I5APB1	B5DZ84	I5APB1	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform C.	0.590
DpseGA11344	A0A0R3NI42	A0A0R3P3U6	A0A0R3NI42	Uncharacterized protein, isoform B.	Uncharacterized protein, isoform D.	0.894
DpseGA28117	I5APB1	B5DSK9	I5APB1	GED domain-containing protein.	Uncharacterized protein, isoform C.	0.540
DpseGA28117	Q296V6	B5DSK9	Q296V6	GED domain-containing protein.	Ras-related protein Rab-11A.	0.541
DpseGA30789	B5DZ84	A0A0R3P1H1	B5DZ84	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.567
DpseGA30789	DpseGA32194	A0A0R3P1H1	A0A0R3P269	Uncharacterized protein.	Uncharacterized protein.	0.550
DpseGA32194	B5DZ84	A0A0R3P269	B5DZ84	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.567
DpseGA32194	DpseGA30789	A0A0R3P269	A0A0R3P1H1	Uncharacterized protein.	Uncharacterized protein.	0.550
I5APB1	B5DZ84	I5APB1	B5DZ84	Uncharacterized protein, isoform C.	Uncharacterized protein, isoform A.	0.590
I5APB1	DpseGA28117	I5APB1	B5DSK9	Uncharacterized protein, isoform C.	GED domain-containing protein.	0.540
I5APB1	Q296V6	I5APB1	Q296V6	Uncharacterized protein, isoform C.	Ras-related protein Rab-11A.	0.411
Q296V6	DpseGA28117	Q296V6	B5DSK9	Ras-related protein Rab-11A.	GED domain-containing protein.	0.541
Q296V6	I5APB1	Q296V6	I5APB1	Ras-related protein Rab-11A.	Uncharacterized protein, isoform C.	0.411