(40 nodes) Animal organ formation network (Drosophila pseudoobscura)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DpseGA22609	Uncharacterized protein, isoform A. (868 aa)
	DpseGA28287	Uncharacterized protein, isoform A. (626 aa)
	DpseGA28528	Uncharacterized protein. (2709 aa)
	DpseGA29267	Uncharacterized protein. (808 aa)
	DpseGA29271	Uncharacterized protein, isoform B. (353 aa)
	DpseGA23784	Uncharacterized protein. (961 aa)
	DpseGA27838	Uncharacterized protein, isoform A. (1448 aa)
	I5ANA3	Uncharacterized protein, isoform I. (487 aa)
	N6WCZ8	Uncharacterized protein. (2217 aa)
	Q28XS1	Uncharacterized protein, isoform A. (1058 aa)
	Q28ZW0	Uncharacterized protein. (137 aa)
	Q291L0	Uncharacterized protein. (613 aa)
	Q291P5	Roundabout, axon guidance receptor 2. (1398 aa)
	Q294I0	Uncharacterized protein, isoform A. (765 aa)
	Q295V9	Uncharacterized protein, isoform G. (1049 aa)
	Dpse_Scr	Antp family, other. (426 aa)
	Q296V6	Ras-related protein Rab-11A. (214 aa)
	Q296Z1	Hairy and enhancer of split, invertebrate. (186 aa)
	Dpse_ato	Atonal protein 1/7. (330 aa)
	Q29AY6	Uncharacterized protein. (1096 aa)
	DpseGA18565	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (527 aa)
	DpseGA14904	Uncharacterized protein. (618 aa)
	DpseGA14619	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1067 aa)
	DpseGA18914	Uncharacterized protein. (1569 aa)
	DpseGA14117	Fork-head domain-containing protein. (349 aa)
	DpseGA10296	BHLH domain-containing protein. (206 aa)
	wg	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (468 aa)
	DpseGA18752	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (836 aa)
	DpseGA17683	Uncharacterized protein, isoform C. (573 aa)
	DpseGA14615	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (619 aa)
	DpseGA16696	Uncharacterized protein. (568 aa)
	DpseGA18719	Uncharacterized protein. (157 aa)
	A0A0R3NGT9	Uncharacterized protein, isoform F. (487 aa)
	A0A0R3NNK2	annotation not available (352 aa)
	DpseGA21569	Uncharacterized protein, isoform B. (3590 aa)
	DpseGA27918	Uncharacterized protein. (188 aa)
	DpseGA28200	Uncharacterized protein, isoform C. (165 aa)
	DpseGA23801	Uncharacterized protein, isoform C. (554 aa)
	DpseGA25243	Uncharacterized protein, isoform A. (591 aa)
	DpseGA28280	Homeobox domain-containing protein. (658 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3NGT9	DpseGA14904	A0A0R3NGT9	Q29H20	Uncharacterized protein, isoform F.	Uncharacterized protein.	0.545
A0A0R3NGT9	DpseGA25243	A0A0R3NGT9	B5DHG8	Uncharacterized protein, isoform F.	Uncharacterized protein, isoform A.	0.946
A0A0R3NGT9	Q29AY6	A0A0R3NGT9	Q29AY6	Uncharacterized protein, isoform F.	Uncharacterized protein.	0.943
A0A0R3NNK2	DpseGA16696	A0A0R3NNK2	Q2M022	annotation not available	Uncharacterized protein.	0.470
A0A0R3NNK2	DpseGA28528	A0A0R3NNK2	B5DM97	annotation not available	Uncharacterized protein.	0.495
A0A0R3NNK2	I5ANA3	A0A0R3NNK2	I5ANA3	annotation not available	Uncharacterized protein, isoform I.	0.613
A0A0R3NNK2	wg	A0A0R3NNK2	Q29N82	annotation not available	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.449
DpseGA14615	DpseGA14904	Q2LZT5	Q29H20	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein.	0.992
DpseGA14615	wg	Q2LZT5	Q29N82	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.967
DpseGA14904	A0A0R3NGT9	Q29H20	A0A0R3NGT9	Uncharacterized protein.	Uncharacterized protein, isoform F.	0.545
DpseGA14904	DpseGA14615	Q29H20	Q2LZT5	Uncharacterized protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.992
DpseGA14904	DpseGA17683	Q29H20	Q29PH9	Uncharacterized protein.	Uncharacterized protein, isoform C.	0.650
DpseGA14904	DpseGA28528	Q29H20	B5DM97	Uncharacterized protein.	Uncharacterized protein.	0.959
DpseGA14904	wg	Q29H20	Q29N82	Uncharacterized protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.860
DpseGA16696	A0A0R3NNK2	Q2M022	A0A0R3NNK2	Uncharacterized protein.	annotation not available	0.470
DpseGA16696	Dpse_ato	Q2M022	Q298I0	Uncharacterized protein.	Atonal protein 1/7.	0.616
DpseGA16696	wg	Q2M022	Q29N82	Uncharacterized protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.400
DpseGA17683	DpseGA14904	Q29PH9	Q29H20	Uncharacterized protein, isoform C.	Uncharacterized protein.	0.650
DpseGA17683	DpseGA27838	Q29PH9	B5DS65	Uncharacterized protein, isoform C.	Uncharacterized protein, isoform A.	0.483
DpseGA17683	DpseGA28528	Q29PH9	B5DM97	Uncharacterized protein, isoform C.	Uncharacterized protein.	0.970