(35 nodes) Axon extension network (Drosophila pseudoobscura)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0R3NH46	Uncharacterized protein, isoform A. (478 aa)
	DpseGA18320	Uncharacterized protein, isoform C. (678 aa)
	DpseGA14074	Uncharacterized protein, isoform B. (1736 aa)
	DpseGA25944	Uncharacterized protein. (186 aa)
	DpseGA26435	Uncharacterized protein, isoform C. (1782 aa)
	DpseGA31031	Uncharacterized protein. (1892 aa)
	DpseGA23604	Uncharacterized protein. (4564 aa)
	DpseGA29217	Uncharacterized protein, isoform B; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. (2304 aa)
	DpseGA26555	Uncharacterized protein, isoform C; Belongs to the potassium channel family. (764 aa)
	DpseGA28096	Uncharacterized protein, isoform B. (2051 aa)
	DpseGA11051	Uncharacterized protein, isoform B. (929 aa)
	DpseGA16706	Uncharacterized protein, isoform E. (1186 aa)
	DpseGA22607	Uncharacterized protein, isoform A. (1248 aa)
	DpseGA28549	Uncharacterized protein. (585 aa)
	DpseGA26564	Ion_trans domain-containing protein; Belongs to the potassium channel family. (171 aa)
	Q28YQ6	Uncharacterized protein, isoform A. (1318 aa)
	Q291M3	Uncharacterized protein. (1819 aa)
	DpseGA19569	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (612 aa)
	DpseGA21999	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (818 aa)
	DpseGA11530	Tyrosine-protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily. (976 aa)
	DpseGA15321	Uncharacterized protein. (192 aa)
	DpseGA14061	Uncharacterized protein, isoform A. (1309 aa)
	DpseGA14904	Uncharacterized protein. (618 aa)
	Cdc42	Cdc42 homolog; Regulates mbt kinase activity and is also required to recruit mbt to adherens junctions. Together with mbt, regulates photoreceptor cell morphogenesis (By similarity). (191 aa)
	DpseGA26093	Uncharacterized protein, isoform J; Cadherins are calcium-dependent cell adhesion proteins. (3120 aa)
	Dpse_Dscam	Dscam, isoform B. (2049 aa)
	A0A0R3NPB6	Wingless-type MMTV integration site family, member 7. (384 aa)
	A0A0R3NHX1	Rho GTPase-activating protein SYDE. (1882 aa)
	DpseGA10833	Uncharacterized protein. (1210 aa)
	DpseGA10675	Protein kinase domain-containing protein. (859 aa)
	DpseGA14615	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (619 aa)
	DpseGA21612	CAP-Gly domain-containing protein. (1262 aa)
	DpseGA13122	Uncharacterized protein. (1496 aa)
	DpseGA20415	Uncharacterized protein, isoform B; Cadherins are calcium-dependent cell adhesion proteins. (1800 aa)
	DpseGA17598	Uncharacterized protein, isoform A. (218 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3NH46	Cdc42	A0A0R3NH46	Q29HY3	Uncharacterized protein, isoform A.	Cdc42 homolog; Regulates mbt kinase activity and is also required to recruit mbt to adherens junctions. Together with mbt, regulates photoreceptor cell morphogenesis (By similarity).	0.605
A0A0R3NH46	DpseGA15321	A0A0R3NH46	Q29EV6	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.605
A0A0R3NH46	DpseGA18320	A0A0R3NH46	A0A0R3NVX7	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform C.	0.982
A0A0R3NHX1	DpseGA10833	A0A0R3NHX1	Q29P18	Rho GTPase-activating protein SYDE.	Uncharacterized protein.	0.474
A0A0R3NPB6	DpseGA14615	A0A0R3NPB6	Q2LZT5	Wingless-type MMTV integration site family, member 7.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.936
A0A0R3NPB6	DpseGA14904	A0A0R3NPB6	Q29H20	Wingless-type MMTV integration site family, member 7.	Uncharacterized protein.	0.659
A0A0R3NPB6	DpseGA21999	A0A0R3NPB6	Q29DI2	Wingless-type MMTV integration site family, member 7.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.871
Cdc42	A0A0R3NH46	Q29HY3	A0A0R3NH46	Cdc42 homolog; Regulates mbt kinase activity and is also required to recruit mbt to adherens junctions. Together with mbt, regulates photoreceptor cell morphogenesis (By similarity).	Uncharacterized protein, isoform A.	0.605
Cdc42	DpseGA13122	Q29HY3	Q29IY8	Cdc42 homolog; Regulates mbt kinase activity and is also required to recruit mbt to adherens junctions. Together with mbt, regulates photoreceptor cell morphogenesis (By similarity).	Uncharacterized protein.	0.634
Cdc42	DpseGA14904	Q29HY3	Q29H20	Cdc42 homolog; Regulates mbt kinase activity and is also required to recruit mbt to adherens junctions. Together with mbt, regulates photoreceptor cell morphogenesis (By similarity).	Uncharacterized protein.	0.603
Cdc42	DpseGA16706	Q29HY3	A0A0R3P899	Cdc42 homolog; Regulates mbt kinase activity and is also required to recruit mbt to adherens junctions. Together with mbt, regulates photoreceptor cell morphogenesis (By similarity).	Uncharacterized protein, isoform E.	0.777
Cdc42	DpseGA18320	Q29HY3	A0A0R3NVX7	Cdc42 homolog; Regulates mbt kinase activity and is also required to recruit mbt to adherens junctions. Together with mbt, regulates photoreceptor cell morphogenesis (By similarity).	Uncharacterized protein, isoform C.	0.544
DpseGA10833	A0A0R3NHX1	Q29P18	A0A0R3NHX1	Uncharacterized protein.	Rho GTPase-activating protein SYDE.	0.474
DpseGA10833	DpseGA28096	Q29P18	A0A0R3NVE1	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.698
DpseGA13122	Cdc42	Q29IY8	Q29HY3	Uncharacterized protein.	Cdc42 homolog; Regulates mbt kinase activity and is also required to recruit mbt to adherens junctions. Together with mbt, regulates photoreceptor cell morphogenesis (By similarity).	0.634
DpseGA13122	DpseGA14615	Q29IY8	Q2LZT5	Uncharacterized protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.659
DpseGA13122	DpseGA14904	Q29IY8	Q29H20	Uncharacterized protein.	Uncharacterized protein.	0.979
DpseGA13122	DpseGA15321	Q29IY8	Q29EV6	Uncharacterized protein.	Uncharacterized protein.	0.606
DpseGA13122	DpseGA16706	Q29IY8	A0A0R3P899	Uncharacterized protein.	Uncharacterized protein, isoform E.	0.598
DpseGA13122	DpseGA21999	Q29IY8	Q29DI2	Uncharacterized protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.465