STRINGSTRING
Ndc1 Ndc1 Q298U5 Q298U5 Q299C1 Q299C1 Q299J6 Q299J6 Q29A14 Q29A14 Q29AB0 Q29AB0 Q29AU1 Q29AU1 Q29AZ4 Q29AZ4 Q29BE0 Q29BE0 Q29BR8 Q29BR8 Q29CC4 Q29CC4 DpseGA21476 DpseGA21476 DpseGA20973 DpseGA20973 DpseGA19306 DpseGA19306 DpseGA18699 DpseGA18699 DpseGA14344 DpseGA14344 DpseGA19986 DpseGA19986 Cbp80 Cbp80 DpseGA22119 DpseGA22119 DpseGA16991 DpseGA16991 DpseGA21947 DpseGA21947 DpseGA10753 DpseGA10753 DpseGA15140 DpseGA15140 e(y)2 e(y)2 DpseGA11496 DpseGA11496 DpseGA14084 DpseGA14084 DpseGA21250 DpseGA21250 DpseGA19826 DpseGA19826 DpseGA18394 DpseGA18394 DpseGA16382 DpseGA16382 DpseGA14464 DpseGA14464 Cog3 Cog3 DpseGA18678 DpseGA18678 DpseGA12520 DpseGA12520 DpseGA20225 DpseGA20225 Sgf11 Sgf11 DpseGA20286 DpseGA20286 DpseGA21612 DpseGA21612 DpseGA19018 DpseGA19018 DpseGA23629 DpseGA23629 DpseGA22604 DpseGA22604 DpseGA29085 DpseGA29085 DpseGA25116 DpseGA25116 DpseGA25698 DpseGA25698 DpseGA26008 DpseGA26008 DpseGA25941 DpseGA25941 DpseGA25189 DpseGA25189 DpseGA30729 DpseGA30729 DpseGA20400 DpseGA20400 DpseGA31282 DpseGA31282 DpseGA30562 DpseGA30562 A0A0R3NLP3 A0A0R3NLP3 A0A0R3NM83 A0A0R3NM83 DpseGA28114 DpseGA28114 DpseGA31311 DpseGA31311 DpseGA31471 DpseGA31471 A0A0R3NX48 A0A0R3NX48 DpseGA30681 DpseGA30681 DpseGA32116 DpseGA32116 DpseGA22965 DpseGA22965 DpseGA22586 DpseGA22586 A0A0R3NIX8 A0A0R3NIX8 DpseGA28376 DpseGA28376 DpseGA28353 DpseGA28353 DpseGA22551 DpseGA22551 DpseGA27639 DpseGA27639 DpseGA29225 DpseGA29225 DpseGA29170 DpseGA29170 DpseGA29327 DpseGA29327 DpseGA22486 DpseGA22486 B5DVY2 B5DVY2 B5DWB8 B5DWB8 B5DWH5 B5DWH5 B5DXF5 B5DXF5 B5DXH4 B5DXH4 B5DY62 B5DY62 B5DYR9 B5DYR9 B5DYS1 B5DYS1 B5E1F0 B5E1F0 B5E1K3 B5E1K3 DpseGA18272 DpseGA18272 I5AP32 I5AP32 Q28WX5 Q28WX5 Q28WZ2 Q28WZ2 Q28X43 Q28X43 DCTN2-p50 DCTN2-p50 Q28Y70 Q28Y70 Q28YW3 Q28YW3 Q28YX3 Q28YX3 Q28ZE7 Q28ZE7 Q291A3 Q291A3 Q291T0 Q291T0 Q292B2 Q292B2 Q293F8 Q293F8 Q293K7 Q293K7 Dpse_e(y)2b Dpse_e(y)2b Q294S7 Q294S7 Q294X1 Q294X1 Q295M0 Q295M0 Mat89Ba Mat89Ba Q295V2 Q295V2 Q295X5 Q295X5 Q296L0 Q296L0 Q296R0 Q296R0 Q297T2 Q297T2 Q298H1 Q298H1 GA18838 GA18838
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ndc1Nucleoporin Ndc1; Component of the nuclear pore complex (NPC), which plays a key role in de novo assembly and insertion of NPC in the nuclear envelope; Belongs to the NDC1 family. (579 aa)
Q298U5AP-2 complex subunit mu-1. (437 aa)
Q299C1Nuclear pore complex protein Nup98-Nup96. (1981 aa)
Q299J6Uncharacterized protein. (718 aa)
Q29A14Glutamyl aminopeptidase. (982 aa)
Q29AB0Histone RNA hairpin-binding protein. (269 aa)
Q29AU1Uncharacterized protein. (2280 aa)
Q29AZ4Nuclear pore complex protein Nup88. (701 aa)
Q29BE0Conserved oligomeric Golgi complex subunit 2. (712 aa)
Q29BR8Signal recognition particle subunit SRP72. (654 aa)
Q29CC4Uncharacterized protein. (956 aa)
DpseGA21476Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1584 aa)
DpseGA20973Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (464 aa)
DpseGA19306Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (180 aa)
DpseGA18699Uncharacterized protein. (139 aa)
DpseGA14344Uncharacterized protein. (274 aa)
DpseGA19986RRM domain-containing protein. (504 aa)
Cbp80Nuclear cap-binding protein subunit 1; Component of the cap-binding complex (CBC), which binds cotranscriptionally to the 5'-cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference via its interaction with Ars2 and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp80 does not bind directly capped RNAs [...] (800 aa)
DpseGA22119TFIIS N-terminal domain-containing protein. (656 aa)
DpseGA16991PCI domain-containing protein. (1402 aa)
DpseGA21947Uncharacterized protein, isoform A. (457 aa)
DpseGA10753Nuclear pore protein. (828 aa)
DpseGA15140Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (528 aa)
e(y)2Enhancer of yellow 2 transcription factor; Involved in mRNA export coupled transcription activation by association with both the AMEX and the SAGA complexes. The SAGA complex is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. Required for nuclear receptor-mediated transactivation. Involved in t [...] (100 aa)
DpseGA11496Uncharacterized protein. (1232 aa)
DpseGA14084Uncharacterized protein. (686 aa)
DpseGA21250Uncharacterized protein, isoform H. (1084 aa)
DpseGA19826Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (839 aa)
DpseGA18394Uncharacterized protein. (1412 aa)
DpseGA16382Uncharacterized protein. (1654 aa)
DpseGA14464Uncharacterized protein, isoform A. (548 aa)
Cog3Conserved oligomeric Golgi complex subunit 3; Involved in ER-Golgi transport. (914 aa)
DpseGA18678Uncharacterized protein, isoform A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1498 aa)
DpseGA12520Uncharacterized protein. (79 aa)
DpseGA20225Uncharacterized protein. (424 aa)
Sgf11SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. Required for nuclear receptor-mediated transactivation. Binds independently on SAGA to promoters in an RNA- dependent manner. Bind [...] (196 aa)
DpseGA20286PCI domain-containing protein. (396 aa)
DpseGA21612CAP-Gly domain-containing protein. (1262 aa)
DpseGA19018WD_REPEATS_REGION domain-containing protein. (352 aa)
DpseGA23629Uncharacterized protein. (946 aa)
DpseGA22604Uncharacterized protein, isoform A. (5496 aa)
DpseGA29085Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family. (845 aa)
DpseGA25116Uncharacterized protein. (799 aa)
DpseGA25698Uncharacterized protein. (488 aa)
DpseGA26008Uncharacterized protein. (845 aa)
DpseGA25941Uncharacterized protein. (200 aa)
DpseGA25189NTF2 domain-containing protein. (616 aa)
DpseGA30729NTF2 domain-containing protein. (617 aa)
DpseGA20400Uncharacterized protein, isoform B. (4663 aa)
DpseGA31282Uncharacterized protein. (356 aa)
DpseGA30562PAZ domain-containing protein. (629 aa)
A0A0R3NLP3Fragile X mental retardation protein. (702 aa)
A0A0R3NM83Nuclear pore complex protein Nup85. (669 aa)
DpseGA28114Uncharacterized protein, isoform B. (913 aa)
DpseGA31311Uncharacterized protein, isoform B. (911 aa)
DpseGA31471Uncharacterized protein. (326 aa)
A0A0R3NX48Uncharacterized protein, isoform A. (2343 aa)
DpseGA30681Uncharacterized protein. (177 aa)
DpseGA32116Piwi domain-containing protein. (145 aa)
DpseGA22965ArgoN domain-containing protein. (219 aa)
DpseGA22586Uncharacterized protein, isoform F. (2046 aa)
A0A0R3NIX8Eukaryotic translation initiation factor 2C. (679 aa)
DpseGA28376Uncharacterized protein. (1161 aa)
DpseGA28353Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (178 aa)
DpseGA22551Uncharacterized protein. (88 aa)
DpseGA27639Uncharacterized protein. (568 aa)
DpseGA29225Uncharacterized protein. (207 aa)
DpseGA29170Uncharacterized protein. (228 aa)
DpseGA29327Uncharacterized protein. (166 aa)
DpseGA22486Uncharacterized protein. (128 aa)
B5DVY2Nuclear pore complex protein Nup93. (798 aa)
B5DWB8Mitochondrial import receptor subunit TOM20. (186 aa)
B5DWH5Uncharacterized protein. (854 aa)
B5DXF5Dynein light intermediate chain 1, cytosolic. (451 aa)
B5DXH4Mitochondrial import receptor subunit TOM20. (172 aa)
B5DY62Eukaryotic translation initiation factor 2C. (972 aa)
B5DYR9Eukaryotic translation initiation factor 2C. (980 aa)
B5DYS1Uncharacterized protein. (339 aa)
B5E1F0Exonuclease 3'-5' domain-containing protein 1. (1013 aa)
B5E1K3Phosphorylated adapter RNA export protein. (462 aa)
DpseGA18272Nucleoporin_N domain-containing protein. (586 aa)
I5AP32Uncharacterized protein, isoform C. (319 aa)
Q28WX5V-type H+-transporting ATPase 16kDa proteolipid subunit. (159 aa)
Q28WZ2Nuclear pore complex protein Nup214. (1709 aa)
Q28X43Uncharacterized protein, isoform A. (321 aa)
DCTN2-p50Dynactin subunit 2; Modulates cytoplasmic dynein binding to an organelle, and plays a role in prometaphase chromosome alignment and spindle organization during mitosis. May play a role in synapse formation during brain development (By similarity). (380 aa)
Q28Y70Uncharacterized protein. (672 aa)
Q28YW3Nuclear pore complex protein Nup188. (1881 aa)
Q28YX3Large subunit ribosomal protein L18. (195 aa)
Q28ZE7Phosphatidylinositol 3-kinase. (966 aa)
Q291A3Uncharacterized protein, isoform A. (1726 aa)
Q291T0Nuclear pore complex protein Nup62. (379 aa)
Q292B2Uncharacterized protein. (347 aa)
Q293F8NTF2-related export protein 1/2. (135 aa)
Q293K7Uncharacterized protein. (284 aa)
Dpse_e(y)2bEnhancer of yellow 2 transcription factor. (102 aa)
Q294S7Vitellogenic carboxypeptidase-like protein. (483 aa)
Q294X1Nuclear pore complex protein Nup93. (798 aa)
Q295M0Ras association domain-containing protein 7/8. (615 aa)
Mat89BaNucleolar protein 6; Belongs to the NRAP family. (1212 aa)
Q295V2Splicing factor, arginine/serine-rich 1. (263 aa)
Q295X5SAP domain-containing ribonucleoprotein. (316 aa)
Q296L0Nuclear pore complex protein Nup121. (1340 aa)
Q296R0Uncharacterized protein. (477 aa)
Q297T2Kinesin family member C1. (702 aa)
Q298H1Uncharacterized protein. (320 aa)
GA18838Zinc finger protein-like 1 homolog. (302 aa)
Your Current Organism:
Drosophila pseudoobscura
NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura
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