(9 nodes) Extracellular matrix binding network (Drosophila pseudoobscura)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0R3NLJ2	Uncharacterized protein, isoform B. (1081 aa)
	B5E141	Uncharacterized protein, isoform A. (119 aa)
	N6V903	annotation not available (1267 aa)
	Q290T3	SPARC-related modular calcium-binding protein. (633 aa)
	Q29BA1	Secreted protein acidic and rich in cysteine. (301 aa)
	DpseGA19283	Uncharacterized protein. (539 aa)
	DpseGA21920	Uncharacterized protein, isoform A; Belongs to the integrin alpha chain family. (1368 aa)
	DpseGA14619	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1067 aa)
	wg	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (468 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B5E141	Q290T3	B5E141	Q290T3	Uncharacterized protein, isoform A.	SPARC-related modular calcium-binding protein.	0.494
DpseGA14619	DpseGA21920	Q29JH5	Q29IK3	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Uncharacterized protein, isoform A; Belongs to the integrin alpha chain family.	0.581
DpseGA21920	DpseGA14619	Q29IK3	Q29JH5	Uncharacterized protein, isoform A; Belongs to the integrin alpha chain family.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.581
Q290T3	B5E141	Q290T3	B5E141	SPARC-related modular calcium-binding protein.	Uncharacterized protein, isoform A.	0.494
Q290T3	Q29BA1	Q290T3	Q29BA1	SPARC-related modular calcium-binding protein.	Secreted protein acidic and rich in cysteine.	0.523
Q29BA1	Q290T3	Q29BA1	Q290T3	Secreted protein acidic and rich in cysteine.	SPARC-related modular calcium-binding protein.	0.523