(8 nodes) Morphogenesis of an epithelial fold network (Drosophila pseudoobscura)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N6W6F6	Uncharacterized protein, isoform D. (867 aa)
	Q295F3	Uncharacterized protein. (292 aa)
	DpseGA21878	FOG_N domain-containing protein. (637 aa)
	A0A0R3NTR6	Rho guanine nucleotide exchange factor 12. (2671 aa)
	wg	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (468 aa)
	DpseGA28528	Uncharacterized protein. (2709 aa)
	B5DZ84	Uncharacterized protein, isoform A. (205 aa)
	Q28Z81	Uncharacterized protein. (504 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3NTR6	B5DZ84	A0A0R3NTR6	B5DZ84	Rho guanine nucleotide exchange factor 12.	Uncharacterized protein, isoform A.	0.968
B5DZ84	A0A0R3NTR6	B5DZ84	A0A0R3NTR6	Uncharacterized protein, isoform A.	Rho guanine nucleotide exchange factor 12.	0.968
B5DZ84	N6W6F6	B5DZ84	N6W6F6	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform D.	0.431
DpseGA28528	wg	B5DM97	Q29N82	Uncharacterized protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.702
N6W6F6	B5DZ84	N6W6F6	B5DZ84	Uncharacterized protein, isoform D.	Uncharacterized protein, isoform A.	0.431
wg	DpseGA28528	Q29N82	B5DM97	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Uncharacterized protein.	0.702