(22 nodes) Dendrite guidance network (Drosophila pseudoobscura)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DpseGA14736	Uncharacterized protein. (391 aa)
	A0A0R3NNU9	Uncharacterized protein, isoform B. (3305 aa)
	Rpd3	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (554 aa)
	DpseGA28654	Uncharacterized protein, isoform B. (1681 aa)
	DpseGA29267	Uncharacterized protein. (808 aa)
	DpseGA29271	Uncharacterized protein, isoform B. (353 aa)
	DpseGA26624	POU domain protein. (378 aa)
	DpseGA23302	Uncharacterized protein. (407 aa)
	B5DXY5	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1. (370 aa)
	B5DZT9	Uncharacterized protein, isoform A. (722 aa)
	I5APW3	annotation not available (1868 aa)
	Q290A3	Uncharacterized protein. (578 aa)
	Q291H3	Uncharacterized protein. (427 aa)
	Q291I8	Uncharacterized protein, isoform C. (2160 aa)
	Q291P5	Roundabout, axon guidance receptor 2. (1398 aa)
	Q291T4	Uncharacterized protein. (799 aa)
	Q295A6	Solute carrier family 35 (UDP-galactose transporter), member B1. (343 aa)
	DpseGA19569	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (612 aa)
	DpseGA14473	Uncharacterized protein. (623 aa)
	DpseGA10441	Uncharacterized protein. (548 aa)
	DpseGA19209	HMG box domain-containing protein. (395 aa)
	DpseGA20210	TIR domain-containing protein. (1557 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3NNU9	Q291H3	A0A0R3NNU9	Q291H3	Uncharacterized protein, isoform B.	Uncharacterized protein.	0.944
A0A0R3NNU9	Q291I8	A0A0R3NNU9	Q291I8	Uncharacterized protein, isoform B.	Uncharacterized protein, isoform C.	0.789
A0A0R3NNU9	Rpd3	A0A0R3NNU9	A0A0R3P6D5	Uncharacterized protein, isoform B.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.515
B5DXY5	DpseGA28654	B5DXY5	A0A0R3P9A6	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.	Uncharacterized protein, isoform B.	0.993
B5DXY5	Q291H3	B5DXY5	Q291H3	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.	Uncharacterized protein.	0.986
B5DXY5	Rpd3	B5DXY5	A0A0R3P6D5	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.483
DpseGA10441	DpseGA26624	Q29MY5	B5DMS3	Uncharacterized protein.	POU domain protein.	0.455
DpseGA10441	Q290A3	Q29MY5	Q290A3	Uncharacterized protein.	Uncharacterized protein.	0.916
DpseGA14473	DpseGA19569	Q29K34	Q29CM8	Uncharacterized protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.857
DpseGA14473	Q291P5	Q29K34	Q291P5	Uncharacterized protein.	Roundabout, axon guidance receptor 2.	0.421
DpseGA14736	Q291P5	Q2M1E5	Q291P5	Uncharacterized protein.	Roundabout, axon guidance receptor 2.	0.630
DpseGA19569	DpseGA14473	Q29CM8	Q29K34	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Uncharacterized protein.	0.857
DpseGA23302	DpseGA29271	B5DS31	B5DMR1	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.899
DpseGA26624	DpseGA10441	B5DMS3	Q29MY5	POU domain protein.	Uncharacterized protein.	0.455
DpseGA28654	B5DXY5	A0A0R3P9A6	B5DXY5	Uncharacterized protein, isoform B.	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.	0.993
DpseGA28654	Q291H3	A0A0R3P9A6	Q291H3	Uncharacterized protein, isoform B.	Uncharacterized protein.	0.988
DpseGA28654	Rpd3	A0A0R3P9A6	A0A0R3P6D5	Uncharacterized protein, isoform B.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.750
DpseGA29267	Q291P5	B5DMQ9	Q291P5	Uncharacterized protein.	Roundabout, axon guidance receptor 2.	0.401
DpseGA29271	DpseGA23302	B5DMR1	B5DS31	Uncharacterized protein, isoform B.	Uncharacterized protein.	0.899
Q290A3	DpseGA10441	Q290A3	Q29MY5	Uncharacterized protein.	Uncharacterized protein.	0.916