13 items (Drosophila pseudoobscura) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DpseGA22602	Uncharacterized protein. (210 aa)
	DpseGA22581	Uncharacterized protein. (214 aa)
	B5E0K0	DNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
	B5E1D3	DNA-directed RNA polymerases I, II, and III subunit RPABC4. (57 aa)
	Q293P4	DNA-directed RNA polymerase II subunit GRINL1A. (374 aa)
	DpseGA27654	Uncharacterized protein. (173 aa)
	Q296B8	DNA-directed RNA polymerases I, II, and III subunit RPABC2. (131 aa)
	Q298X6	DNA-directed RNA polymerase II subunit RPB2. (1176 aa)
	Q299B2	DNA-directed RNA polymerase II subunit RPB9. (134 aa)
	Q29BZ5	DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
	RpII215	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1889 aa)
	DpseGA20659	RPOLD domain-containing protein. (275 aa)
	DpseGA19897	RNA_pol_L_2 domain-containing protein. (117 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B5E0K0	B5E1D3	B5E0K0	B5E1D3	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	0.945
B5E0K0	DpseGA19897	B5E0K0	Q29MR4	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	RNA_pol_L_2 domain-containing protein.	0.938
B5E0K0	DpseGA20659	B5E0K0	Q29K78	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	RPOLD domain-containing protein.	0.948
B5E0K0	DpseGA22581	B5E0K0	B5DLP1	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	Uncharacterized protein.	0.901
B5E0K0	DpseGA22602	B5E0K0	B5DLL1	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	Uncharacterized protein.	0.901
B5E0K0	DpseGA27654	B5E0K0	Q294T7	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	Uncharacterized protein.	0.938
B5E0K0	Q293P4	B5E0K0	Q293P4	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	DNA-directed RNA polymerase II subunit GRINL1A.	0.597
B5E0K0	Q296B8	B5E0K0	Q296B8	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	0.972
B5E0K0	Q298X6	B5E0K0	Q298X6	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	DNA-directed RNA polymerase II subunit RPB2.	0.952
B5E0K0	Q299B2	B5E0K0	Q299B2	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	DNA-directed RNA polymerase II subunit RPB9.	0.936
B5E0K0	Q29BZ5	B5E0K0	Q29BZ5	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	DNA-directed RNA polymerases I, II, and III subunit RPABC5.	0.968
B5E0K0	RpII215	B5E0K0	Q29IN2	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.925
B5E1D3	B5E0K0	B5E1D3	B5E0K0	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	0.945
B5E1D3	DpseGA19897	B5E1D3	Q29MR4	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	RNA_pol_L_2 domain-containing protein.	0.999
B5E1D3	DpseGA20659	B5E1D3	Q29K78	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	RPOLD domain-containing protein.	0.998
B5E1D3	DpseGA22581	B5E1D3	B5DLP1	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	Uncharacterized protein.	0.945
B5E1D3	DpseGA22602	B5E1D3	B5DLL1	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	Uncharacterized protein.	0.945
B5E1D3	DpseGA27654	B5E1D3	Q294T7	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	Uncharacterized protein.	0.998
B5E1D3	Q293P4	B5E1D3	Q293P4	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	DNA-directed RNA polymerase II subunit GRINL1A.	0.682
B5E1D3	Q296B8	B5E1D3	Q296B8	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	0.999