20 items (Drosophila pseudoobscura) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0R3NTF2	DNA-directed RNA polymerase III subunit RPC11. (108 aa)
	DpseGA20275	Uncharacterized protein. (240 aa)
	DpseGA18690	Uncharacterized protein, isoform A. (424 aa)
	DpseGA17664	RPOLD domain-containing protein. (333 aa)
	DpseGA18494	RPOL4c domain-containing protein. (166 aa)
	DpseGA10493	RNA_pol_L_2 domain-containing protein. (110 aa)
	DpseGA14391	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (699 aa)
	Q29B17	DNA-directed RNA polymerase III subunit RPC3. (522 aa)
	Q298N3	DNA-directed RNA polymerase III subunit RPC6. (293 aa)
	Coq2	4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate. (397 aa)
	Q296B8	DNA-directed RNA polymerases I, II, and III subunit RPABC2. (131 aa)
	Q28ZV6	DNA-directed RNA polymerase III subunit RPC2. (1137 aa)
	B5E1D3	DNA-directed RNA polymerases I, II, and III subunit RPABC4. (57 aa)
	B5E0K0	DNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
	DpseGA24006	Uncharacterized protein. (300 aa)
	DpseGA22253	RNA_pol_Rpb1_5 domain-containing protein. (342 aa)
	DpseGA23837	Uncharacterized protein. (213 aa)
	DpseGA22581	Uncharacterized protein. (214 aa)
	DpseGA22602	Uncharacterized protein. (210 aa)
	DpseGA28895	Uncharacterized protein, isoform C. (268 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3NTF2	B5E0K0	A0A0R3NTF2	B5E0K0	DNA-directed RNA polymerase III subunit RPC11.	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	0.947
A0A0R3NTF2	B5E1D3	A0A0R3NTF2	B5E1D3	DNA-directed RNA polymerase III subunit RPC11.	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	0.994
A0A0R3NTF2	DpseGA10493	A0A0R3NTF2	Q29CK4	DNA-directed RNA polymerase III subunit RPC11.	RNA_pol_L_2 domain-containing protein.	0.992
A0A0R3NTF2	DpseGA14391	A0A0R3NTF2	Q29CI9	DNA-directed RNA polymerase III subunit RPC11.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.932
A0A0R3NTF2	DpseGA17664	A0A0R3NTF2	Q29L21	DNA-directed RNA polymerase III subunit RPC11.	RPOLD domain-containing protein.	0.998
A0A0R3NTF2	DpseGA18494	A0A0R3NTF2	Q29FL2	DNA-directed RNA polymerase III subunit RPC11.	RPOL4c domain-containing protein.	0.993
A0A0R3NTF2	DpseGA18690	A0A0R3NTF2	Q2LZ05	DNA-directed RNA polymerase III subunit RPC11.	Uncharacterized protein, isoform A.	0.998
A0A0R3NTF2	DpseGA20275	A0A0R3NTF2	Q2LZ71	DNA-directed RNA polymerase III subunit RPC11.	Uncharacterized protein.	0.986
A0A0R3NTF2	DpseGA22253	A0A0R3NTF2	B5DTL9	DNA-directed RNA polymerase III subunit RPC11.	RNA_pol_Rpb1_5 domain-containing protein.	0.932
A0A0R3NTF2	DpseGA22581	A0A0R3NTF2	B5DLP1	DNA-directed RNA polymerase III subunit RPC11.	Uncharacterized protein.	0.947
A0A0R3NTF2	DpseGA22602	A0A0R3NTF2	B5DLL1	DNA-directed RNA polymerase III subunit RPC11.	Uncharacterized protein.	0.947
A0A0R3NTF2	DpseGA23837	A0A0R3NTF2	B5DQ42	DNA-directed RNA polymerase III subunit RPC11.	Uncharacterized protein.	0.958
A0A0R3NTF2	DpseGA24006	A0A0R3NTF2	B5DTR3	DNA-directed RNA polymerase III subunit RPC11.	Uncharacterized protein.	0.932
A0A0R3NTF2	DpseGA28895	A0A0R3NTF2	B5DJG3	DNA-directed RNA polymerase III subunit RPC11.	Uncharacterized protein, isoform C.	0.958
A0A0R3NTF2	Q28ZV6	A0A0R3NTF2	Q28ZV6	DNA-directed RNA polymerase III subunit RPC11.	DNA-directed RNA polymerase III subunit RPC2.	0.999
A0A0R3NTF2	Q296B8	A0A0R3NTF2	Q296B8	DNA-directed RNA polymerase III subunit RPC11.	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	0.997
A0A0R3NTF2	Q298N3	A0A0R3NTF2	Q298N3	DNA-directed RNA polymerase III subunit RPC11.	DNA-directed RNA polymerase III subunit RPC6.	0.997
A0A0R3NTF2	Q29B17	A0A0R3NTF2	Q29B17	DNA-directed RNA polymerase III subunit RPC11.	DNA-directed RNA polymerase III subunit RPC3.	0.993
B5E0K0	A0A0R3NTF2	B5E0K0	A0A0R3NTF2	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	DNA-directed RNA polymerase III subunit RPC11.	0.947
B5E0K0	B5E1D3	B5E0K0	B5E1D3	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	0.945