14 items (Drosophila pseudoobscura) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DpseGA10493	RNA_pol_L_2 domain-containing protein. (110 aa)
	DpseGA22602	Uncharacterized protein. (210 aa)
	DpseGA22581	Uncharacterized protein. (214 aa)
	B5DY07	4a-hydroxytetrahydrobiopterin dehydratase. (193 aa)
	B5E0K0	DNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
	B5E1D3	DNA-directed RNA polymerases I, II, and III subunit RPABC4. (57 aa)
	Q291D4	DNA-directed RNA polymerase I subunit RPA1. (1647 aa)
	Q296B8	DNA-directed RNA polymerases I, II, and III subunit RPABC2. (131 aa)
	Q29AR6	DNA-directed RNA polymerase I subunit RPA12. (121 aa)
	Q29BZ5	DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
	DpseGA12515	Uncharacterized protein. (257 aa)
	DpseGA17664	RPOLD domain-containing protein. (333 aa)
	DpseGA17896	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1126 aa)
	DpseGA10862	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (149 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B5E0K0	B5E1D3	B5E0K0	B5E1D3	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	0.945
B5E0K0	DpseGA10493	B5E0K0	Q29CK4	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	RNA_pol_L_2 domain-containing protein.	0.970
B5E0K0	DpseGA10862	B5E0K0	Q2M0A5	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.962
B5E0K0	DpseGA12515	B5E0K0	Q29JY4	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	Uncharacterized protein.	0.954
B5E0K0	DpseGA17664	B5E0K0	Q29L21	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	RPOLD domain-containing protein.	0.966
B5E0K0	DpseGA17896	B5E0K0	Q29N37	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.950
B5E0K0	DpseGA22581	B5E0K0	B5DLP1	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	Uncharacterized protein.	0.901
B5E0K0	DpseGA22602	B5E0K0	B5DLL1	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	Uncharacterized protein.	0.901
B5E0K0	Q291D4	B5E0K0	Q291D4	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	DNA-directed RNA polymerase I subunit RPA1.	0.944
B5E0K0	Q296B8	B5E0K0	Q296B8	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	0.972
B5E0K0	Q29AR6	B5E0K0	Q29AR6	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	DNA-directed RNA polymerase I subunit RPA12.	0.930
B5E0K0	Q29BZ5	B5E0K0	Q29BZ5	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	DNA-directed RNA polymerases I, II, and III subunit RPABC5.	0.968
B5E1D3	B5E0K0	B5E1D3	B5E0K0	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	0.945
B5E1D3	DpseGA10493	B5E1D3	Q29CK4	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	RNA_pol_L_2 domain-containing protein.	0.998
B5E1D3	DpseGA10862	B5E1D3	Q2M0A5	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
B5E1D3	DpseGA12515	B5E1D3	Q29JY4	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	Uncharacterized protein.	0.997
B5E1D3	DpseGA17664	B5E1D3	Q29L21	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	RPOLD domain-containing protein.	0.998
B5E1D3	DpseGA17896	B5E1D3	Q29N37	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
B5E1D3	DpseGA22581	B5E1D3	B5DLP1	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	Uncharacterized protein.	0.945
B5E1D3	DpseGA22602	B5E1D3	B5DLL1	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	Uncharacterized protein.	0.945