(11 nodes) CCR4-NOT complex network (Drosophila pseudoobscura)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0R3NHQ7	CCR4-NOT transcription complex subunit 2. (574 aa)
	Q290A1	Uncharacterized protein. (228 aa)
	Q29BS1	CCR4-NOT transcription complex subunit 10. (641 aa)
	DpseGA21070	Uncharacterized protein, isoform A. (882 aa)
	DpseGA13611	NOT2_3_5 domain-containing protein. (674 aa)
	DpseGA19054	Uncharacterized protein, isoform B. (395 aa)
	DpseGA28160	Uncharacterized protein. (774 aa)
	DpseGA19696	Uncharacterized protein. (568 aa)
	I5ANY9	CCR4-NOT transcription complex subunit 6. (551 aa)
	I5ANZ3	Uncharacterized protein. (652 aa)
	N6W6M1	CCR4-NOT transcription complex subunit 1. (2561 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3NHQ7	DpseGA13611	A0A0R3NHQ7	Q29KU3	CCR4-NOT transcription complex subunit 2.	NOT2_3_5 domain-containing protein.	0.902
A0A0R3NHQ7	DpseGA19054	A0A0R3NHQ7	A0A0R3P6B5	CCR4-NOT transcription complex subunit 2.	Uncharacterized protein, isoform B.	0.963
A0A0R3NHQ7	DpseGA21070	A0A0R3NHQ7	Q29K24	CCR4-NOT transcription complex subunit 2.	Uncharacterized protein, isoform A.	0.990
A0A0R3NHQ7	DpseGA28160	A0A0R3NHQ7	B5DRY7	CCR4-NOT transcription complex subunit 2.	Uncharacterized protein.	0.942
A0A0R3NHQ7	I5ANY9	A0A0R3NHQ7	I5ANY9	CCR4-NOT transcription complex subunit 2.	CCR4-NOT transcription complex subunit 6.	0.822
A0A0R3NHQ7	I5ANZ3	A0A0R3NHQ7	I5ANZ3	CCR4-NOT transcription complex subunit 2.	Uncharacterized protein.	0.822
A0A0R3NHQ7	N6W6M1	A0A0R3NHQ7	N6W6M1	CCR4-NOT transcription complex subunit 2.	CCR4-NOT transcription complex subunit 1.	0.991
A0A0R3NHQ7	Q290A1	A0A0R3NHQ7	Q290A1	CCR4-NOT transcription complex subunit 2.	Uncharacterized protein.	0.925
A0A0R3NHQ7	Q29BS1	A0A0R3NHQ7	Q29BS1	CCR4-NOT transcription complex subunit 2.	CCR4-NOT transcription complex subunit 10.	0.932
DpseGA13611	A0A0R3NHQ7	Q29KU3	A0A0R3NHQ7	NOT2_3_5 domain-containing protein.	CCR4-NOT transcription complex subunit 2.	0.902
DpseGA13611	DpseGA19054	Q29KU3	A0A0R3P6B5	NOT2_3_5 domain-containing protein.	Uncharacterized protein, isoform B.	0.966
DpseGA13611	DpseGA21070	Q29KU3	Q29K24	NOT2_3_5 domain-containing protein.	Uncharacterized protein, isoform A.	0.971
DpseGA13611	DpseGA28160	Q29KU3	B5DRY7	NOT2_3_5 domain-containing protein.	Uncharacterized protein.	0.944
DpseGA13611	I5ANY9	Q29KU3	I5ANY9	NOT2_3_5 domain-containing protein.	CCR4-NOT transcription complex subunit 6.	0.822
DpseGA13611	I5ANZ3	Q29KU3	I5ANZ3	NOT2_3_5 domain-containing protein.	Uncharacterized protein.	0.822
DpseGA13611	N6W6M1	Q29KU3	N6W6M1	NOT2_3_5 domain-containing protein.	CCR4-NOT transcription complex subunit 1.	0.962
DpseGA13611	Q290A1	Q29KU3	Q290A1	NOT2_3_5 domain-containing protein.	Uncharacterized protein.	0.901
DpseGA13611	Q29BS1	Q29KU3	Q29BS1	NOT2_3_5 domain-containing protein.	CCR4-NOT transcription complex subunit 10.	0.902
DpseGA19054	A0A0R3NHQ7	A0A0R3P6B5	A0A0R3NHQ7	Uncharacterized protein, isoform B.	CCR4-NOT transcription complex subunit 2.	0.963
DpseGA19054	DpseGA13611	A0A0R3P6B5	Q29KU3	Uncharacterized protein, isoform B.	NOT2_3_5 domain-containing protein.	0.966