(10 nodes) Endoplasmic reticulum exit site network (Drosophila pseudoobscura)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B5DZI1	Uncharacterized protein, isoform A. (1175 aa)
	DpseGA19678	Uncharacterized protein. (755 aa)
	DpseGA11613	Protein YIPF. (261 aa)
	Q298N7	GTP-binding protein SAR1. (193 aa)
	I5ANM9	Uncharacterized protein, isoform A. (785 aa)
	DpseGA14231	Uncharacterized protein, isoform A. (1224 aa)
	DpseGA10757	Uncharacterized protein. (1440 aa)
	A0A0R3NPI3	Uncharacterized protein, isoform A. (1266 aa)
	DpseGA22960	Sec16_C domain-containing protein. (2394 aa)
	DpseGA22382	Uncharacterized protein. (205 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3NPI3	B5DZI1	A0A0R3NPI3	B5DZI1	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform A.	0.999
A0A0R3NPI3	DpseGA10757	A0A0R3NPI3	Q29JV8	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.663
A0A0R3NPI3	DpseGA11613	A0A0R3NPI3	Q29L64	Uncharacterized protein, isoform A.	Protein YIPF.	0.421
A0A0R3NPI3	DpseGA22960	A0A0R3NPI3	B5DKY4	Uncharacterized protein, isoform A.	Sec16_C domain-containing protein.	0.955
A0A0R3NPI3	I5ANM9	A0A0R3NPI3	I5ANM9	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform A.	0.999
A0A0R3NPI3	Q298N7	A0A0R3NPI3	Q298N7	Uncharacterized protein, isoform A.	GTP-binding protein SAR1.	0.998
B5DZI1	A0A0R3NPI3	B5DZI1	A0A0R3NPI3	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform A.	0.999
B5DZI1	DpseGA11613	B5DZI1	Q29L64	Uncharacterized protein, isoform A.	Protein YIPF.	0.472
B5DZI1	DpseGA22960	B5DZI1	B5DKY4	Uncharacterized protein, isoform A.	Sec16_C domain-containing protein.	0.984
B5DZI1	I5ANM9	B5DZI1	I5ANM9	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform A.	0.999
B5DZI1	Q298N7	B5DZI1	Q298N7	Uncharacterized protein, isoform A.	GTP-binding protein SAR1.	0.981
DpseGA10757	A0A0R3NPI3	Q29JV8	A0A0R3NPI3	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.663
DpseGA10757	DpseGA22960	Q29JV8	B5DKY4	Uncharacterized protein.	Sec16_C domain-containing protein.	0.600
DpseGA10757	I5ANM9	Q29JV8	I5ANM9	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.768
DpseGA10757	Q298N7	Q29JV8	Q298N7	Uncharacterized protein.	GTP-binding protein SAR1.	0.608
DpseGA11613	A0A0R3NPI3	Q29L64	A0A0R3NPI3	Protein YIPF.	Uncharacterized protein, isoform A.	0.421
DpseGA11613	B5DZI1	Q29L64	B5DZI1	Protein YIPF.	Uncharacterized protein, isoform A.	0.472
DpseGA11613	I5ANM9	Q29L64	I5ANM9	Protein YIPF.	Uncharacterized protein, isoform A.	0.590
DpseGA11613	Q298N7	Q29L64	Q298N7	Protein YIPF.	GTP-binding protein SAR1.	0.417
DpseGA22960	A0A0R3NPI3	B5DKY4	A0A0R3NPI3	Sec16_C domain-containing protein.	Uncharacterized protein, isoform A.	0.955