33 items (Drosophila pseudoobscura) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0R3NTF2	DNA-directed RNA polymerase III subunit RPC11. (108 aa)
	DpseGA28895	Uncharacterized protein, isoform C. (268 aa)
	DpseGA22602	Uncharacterized protein. (210 aa)
	DpseGA22581	Uncharacterized protein. (214 aa)
	DpseGA23837	Uncharacterized protein. (213 aa)
	DpseGA22253	RNA_pol_Rpb1_5 domain-containing protein. (342 aa)
	DpseGA24006	Uncharacterized protein. (300 aa)
	DpseGA25490	Uncharacterized protein. (385 aa)
	B5DWI8	DNA-directed RNA polymerase I subunit RPA49. (385 aa)
	B5E0K0	DNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
	B5E1D3	DNA-directed RNA polymerases I, II, and III subunit RPABC4. (57 aa)
	Q28ZV6	DNA-directed RNA polymerase III subunit RPC2. (1137 aa)
	Q291D4	DNA-directed RNA polymerase I subunit RPA1. (1647 aa)
	DpseGA27654	Uncharacterized protein. (173 aa)
	Q296B8	DNA-directed RNA polymerases I, II, and III subunit RPABC2. (131 aa)
	Q298N3	DNA-directed RNA polymerase III subunit RPC6. (293 aa)
	Q298X6	DNA-directed RNA polymerase II subunit RPB2. (1176 aa)
	Q299B2	DNA-directed RNA polymerase II subunit RPB9. (134 aa)
	Q29AR6	DNA-directed RNA polymerase I subunit RPA12. (121 aa)
	Q29B17	DNA-directed RNA polymerase III subunit RPC3. (522 aa)
	Q29BZ5	DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
	DpseGA14391	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (699 aa)
	DpseGA10493	RNA_pol_L_2 domain-containing protein. (110 aa)
	RpII215	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1889 aa)
	DpseGA12515	Uncharacterized protein. (257 aa)
	DpseGA20659	RPOLD domain-containing protein. (275 aa)
	DpseGA17664	RPOLD domain-containing protein. (333 aa)
	DpseGA19897	RNA_pol_L_2 domain-containing protein. (117 aa)
	DpseGA17896	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1126 aa)
	DpseGA18690	Uncharacterized protein, isoform A. (424 aa)
	DpseGA20275	Uncharacterized protein. (240 aa)
	DpseGA10862	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (149 aa)
	DpseGA10413	Uncharacterized protein. (476 aa)

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3NTF2	B5DWI8	A0A0R3NTF2	B5DWI8	DNA-directed RNA polymerase III subunit RPC11.	DNA-directed RNA polymerase I subunit RPA49.	0.844
A0A0R3NTF2	B5E0K0	A0A0R3NTF2	B5E0K0	DNA-directed RNA polymerase III subunit RPC11.	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	0.947
A0A0R3NTF2	B5E1D3	A0A0R3NTF2	B5E1D3	DNA-directed RNA polymerase III subunit RPC11.	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	0.994
A0A0R3NTF2	DpseGA10413	A0A0R3NTF2	Q2M162	DNA-directed RNA polymerase III subunit RPC11.	Uncharacterized protein.	0.996
A0A0R3NTF2	DpseGA10493	A0A0R3NTF2	Q29CK4	DNA-directed RNA polymerase III subunit RPC11.	RNA_pol_L_2 domain-containing protein.	0.992
A0A0R3NTF2	DpseGA10862	A0A0R3NTF2	Q2M0A5	DNA-directed RNA polymerase III subunit RPC11.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.996
A0A0R3NTF2	DpseGA12515	A0A0R3NTF2	Q29JY4	DNA-directed RNA polymerase III subunit RPC11.	Uncharacterized protein.	0.962
A0A0R3NTF2	DpseGA14391	A0A0R3NTF2	Q29CI9	DNA-directed RNA polymerase III subunit RPC11.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.932
A0A0R3NTF2	DpseGA17664	A0A0R3NTF2	Q29L21	DNA-directed RNA polymerase III subunit RPC11.	RPOLD domain-containing protein.	0.998
A0A0R3NTF2	DpseGA17896	A0A0R3NTF2	Q29N37	DNA-directed RNA polymerase III subunit RPC11.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.854
A0A0R3NTF2	DpseGA18690	A0A0R3NTF2	Q2LZ05	DNA-directed RNA polymerase III subunit RPC11.	Uncharacterized protein, isoform A.	0.998
A0A0R3NTF2	DpseGA19897	A0A0R3NTF2	Q29MR4	DNA-directed RNA polymerase III subunit RPC11.	RNA_pol_L_2 domain-containing protein.	0.942
A0A0R3NTF2	DpseGA20275	A0A0R3NTF2	Q2LZ71	DNA-directed RNA polymerase III subunit RPC11.	Uncharacterized protein.	0.986
A0A0R3NTF2	DpseGA20659	A0A0R3NTF2	Q29K78	DNA-directed RNA polymerase III subunit RPC11.	RPOLD domain-containing protein.	0.893
A0A0R3NTF2	DpseGA22253	A0A0R3NTF2	B5DTL9	DNA-directed RNA polymerase III subunit RPC11.	RNA_pol_Rpb1_5 domain-containing protein.	0.932
A0A0R3NTF2	DpseGA22581	A0A0R3NTF2	B5DLP1	DNA-directed RNA polymerase III subunit RPC11.	Uncharacterized protein.	0.947
A0A0R3NTF2	DpseGA22602	A0A0R3NTF2	B5DLL1	DNA-directed RNA polymerase III subunit RPC11.	Uncharacterized protein.	0.947
A0A0R3NTF2	DpseGA23837	A0A0R3NTF2	B5DQ42	DNA-directed RNA polymerase III subunit RPC11.	Uncharacterized protein.	0.958
A0A0R3NTF2	DpseGA24006	A0A0R3NTF2	B5DTR3	DNA-directed RNA polymerase III subunit RPC11.	Uncharacterized protein.	0.932
A0A0R3NTF2	DpseGA25490	A0A0R3NTF2	B5DUV6	DNA-directed RNA polymerase III subunit RPC11.	Uncharacterized protein.	0.844