(16 nodes) Mixed, incl. Polyamine binding, and TOBE domain network (Bordetella flabilis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANN80139.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
	potA	Fe3+/spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (350 aa)
	ANN80140.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
	ANN75931.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
	ANN76132.1	AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (519 aa)
	ANN76133.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (584 aa)
	ANN76134.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (345 aa)
	ANN76135.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (352 aa)
	ANN77738.1	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
	ANN77739.1	Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)
	ANN77740.1	Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)
	ANN77741.1	Fe3+/spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (364 aa)
	ANN77765.1	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
	ANN77766.1	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
	potA-4	Fe3+/spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (356 aa)
	ANN77767.1	Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)

Your Current Organism:

Bordetella flabilis

NCBI taxonomy Id: 463014
Other names: B. flabilis, Bordetella flabilis Vandamme et al. 2015, Bordetella sp. AU10664, CCUG 56827, LMG 28642, LMG:28642, strain AU10664

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANN75931.1	ANN76133.1	BAU07_01240	BAU07_02465	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.883
ANN75931.1	ANN76134.1	BAU07_01240	BAU07_02470	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.519
ANN75931.1	ANN77738.1	BAU07_01240	BAU07_12035	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.608
ANN75931.1	ANN77739.1	BAU07_01240	BAU07_12040	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.592
ANN75931.1	ANN77741.1	BAU07_01240	BAU07_12050	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fe3+/spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.490
ANN75931.1	ANN77765.1	BAU07_01240	BAU07_12200	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.697
ANN75931.1	ANN77766.1	BAU07_01240	BAU07_12205	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.695
ANN75931.1	ANN80139.1	BAU07_01240	BAU07_01210	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.863
ANN75931.1	ANN80140.1	BAU07_01240	BAU07_01220	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.851
ANN75931.1	potA	BAU07_01240	BAU07_01215	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fe3+/spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.637
ANN75931.1	potA-4	BAU07_01240	BAU07_12210	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fe3+/spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.490
ANN76132.1	ANN76133.1	BAU07_02460	BAU07_02465	AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
ANN76132.1	ANN76134.1	BAU07_02460	BAU07_02470	AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.756
ANN76132.1	ANN76135.1	BAU07_02460	BAU07_02475	AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.639
ANN76133.1	ANN75931.1	BAU07_02465	BAU07_01240	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.883
ANN76133.1	ANN76132.1	BAU07_02465	BAU07_02460	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
ANN76133.1	ANN76134.1	BAU07_02465	BAU07_02470	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.983
ANN76133.1	ANN76135.1	BAU07_02465	BAU07_02475	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
ANN76133.1	ANN77738.1	BAU07_02465	BAU07_12035	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.519
ANN76133.1	ANN77739.1	BAU07_02465	BAU07_12040	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.574

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