(8 nodes) Coenzyme A transferase family I network (Bordetella bronchialis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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protein homology

Your Input:
	ANN73819.1	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
	ANN71339.1	succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
	ANN72034.1	CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
	ANN72033.1	Glutaconate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)
	ANN70244.1	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)
	ANN70245.1	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
	ANN71338.1	succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
	ANN73818.1	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)

Your Current Organism:

Bordetella bronchialis

NCBI taxonomy Id: 463025
Other names: B. bronchialis, Bordetella bronchialis Vandamme et al. 2015, Bordetella genogroup 3, Bordetella genomosp. 3, Bordetella sp. AU3182, Bordetella sp. AU6843, Bordetella sp. AU7049, Bordetella sp. AU7089, CCUG 56828, LMG 28640, LMG:28640, strain AU3182

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANN70244.1	ANN70245.1	BAU08_01810	BAU08_01815	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ANN70244.1	ANN71338.1	BAU08_01810	BAU08_08320	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
ANN70244.1	ANN72034.1	BAU08_01810	BAU08_12445	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
ANN70244.1	ANN73818.1	BAU08_01810	BAU08_22875	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ANN70244.1	ANN73819.1	BAU08_01810	BAU08_22880	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
ANN70245.1	ANN70244.1	BAU08_01815	BAU08_01810	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ANN70245.1	ANN71339.1	BAU08_01815	BAU08_08325	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
ANN70245.1	ANN72033.1	BAU08_01815	BAU08_12440	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutaconate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.754
ANN70245.1	ANN73818.1	BAU08_01815	BAU08_22875	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
ANN70245.1	ANN73819.1	BAU08_01815	BAU08_22880	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ANN71338.1	ANN70244.1	BAU08_08320	BAU08_01810	succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
ANN71338.1	ANN71339.1	BAU08_08320	BAU08_08325	succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ANN71338.1	ANN72033.1	BAU08_08320	BAU08_12440	succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutaconate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.754
ANN71338.1	ANN73819.1	BAU08_08320	BAU08_22880	succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
ANN71339.1	ANN70245.1	BAU08_08325	BAU08_01815	succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
ANN71339.1	ANN71338.1	BAU08_08325	BAU08_08320	succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ANN71339.1	ANN72034.1	BAU08_08325	BAU08_12445	succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
ANN71339.1	ANN73818.1	BAU08_08325	BAU08_22875	succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
ANN72033.1	ANN70245.1	BAU08_12440	BAU08_01815	Glutaconate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.754
ANN72033.1	ANN71338.1	BAU08_12440	BAU08_08320	Glutaconate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.754

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