STRINGSTRING
SMF71865.1 SMF71865.1 SMF68510.1 SMF68510.1 SMF47743.1 SMF47743.1 SMF74885.1 SMF74885.1 SMF44983.1 SMF44983.1 SMF75268.1 SMF75268.1 SMF20382.1 SMF20382.1 SMF70100.1 SMF70100.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMF71865.1PAS domain S-box-containing protein. (974 aa)
SMF68510.1Two-component system, cell cycle sensor histidine kinase and response regulator CckA. (869 aa)
SMF47743.1PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (503 aa)
SMF74885.1PAS domain S-box-containing protein. (738 aa)
SMF44983.1PAS domain S-box-containing protein. (556 aa)
SMF75268.1PAS domain S-box-containing protein. (1244 aa)
SMF20382.1Hypothetical protein. (1030 aa)
SMF70100.1PAS fold-containing protein. (237 aa)
Your Current Organism:
Rhizobium oryzae
NCBI taxonomy Id: 464029
Other names: Allorhizobium oryzae, Allorhizobium oryzae (Peng et al. 2008) Mousavi et al. 2016, CGMCC 1.7048, HAMBI 3197, LMG 24253, LMG:24253, R. oryzae, Rhizobium oryzae Peng et al. 2008, strain Alt 505
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