STRINGSTRING
AMB83877.1 AMB83877.1 aqpZ aqpZ glpD glpD AMB85636.1 AMB85636.1 glpK glpK AMB85638.1 AMB85638.1 AMB85639.1 AMB85639.1 AMB85640.1 AMB85640.1 AMB86783.1 AMB86783.1 AMB86956.1 AMB86956.1 AMB87416.1 AMB87416.1 AMB87417.1 AMB87417.1 AMB87418.1 AMB87418.1 AMB87419.1 AMB87419.1 AMB87609.1 AMB87609.1 AMB87787.1 AMB87787.1 AMB87853.1 AMB87853.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMB83877.1Transcriptional initiation protein Tat; Derived by automated computational analysis using gene prediction method: Protein Homology. (633 aa)
aqpZAquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family. (232 aa)
glpDGlycerol-3-phosphate dehydrogenase; In Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (514 aa)
AMB85636.1DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
glpKGlycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. (501 aa)
AMB85638.1Aquaporin; Involved in the transport of glycerol into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MIP/aquaporin (TC 1.A.8) family. (282 aa)
AMB85639.1aminoacyl-tRNA deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. (156 aa)
AMB85640.1Isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
AMB86783.1Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (513 aa)
AMB86956.1Hydroxyglutarate oxidase; Catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology. (397 aa)
AMB87416.1Multidrug DMT transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa)
AMB87417.1FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)
AMB87418.1Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
AMB87419.1Metal ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
AMB87609.1DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
AMB87787.1Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (374 aa)
AMB87853.1Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
Your Current Organism:
Pseudomonas agarici
NCBI taxonomy Id: 46677
Other names: ATCC 25941, CCUG 32769, CFBP 2063, CIP 106703, DSM 11810, ICMP 2656, JCM 12566, LMG 2112, LMG:2112, NCPPB 2289, P. agarici
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