(8 nodes) AhpC/TSA family network (Pseudomonas mucidolens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SDU83729.1	Peroxiredoxin (alkyl hydroperoxide reductase subunit C). (200 aa)
	SDV08347.1	Protein SCO1/2. (211 aa)
	SDV09916.1	1-Cys peroxiredoxin. (212 aa)
	SDV11098.1	Cytochrome c biogenesis protein CcdA. (408 aa)
	SDU86654.1	Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. (178 aa)
	tpx	Thiol peroxidase (atypical 2-Cys peroxiredoxin); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. (166 aa)
	SDU92417.1	Protein SCO1/2. (230 aa)
	SDU98643.1	Prolipoprotein diacylglyceryl transferase. (289 aa)

Your Current Organism:

Pseudomonas mucidolens

NCBI taxonomy Id: 46679
Other names: ATCC 4685, CIP 103298, IAM 12406, JCM 2781, LMG 2223, LMG:2223, NBRC 103159, NCTC 8068, NRRL B-16, P. mucidolens

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDU83729.1	SDU86654.1	SAMN05216202_0333	SAMN05216202_0801	Peroxiredoxin (alkyl hydroperoxide reductase subunit C).	Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.	0.827
SDU83729.1	SDU98643.1	SAMN05216202_0333	SAMN05216202_2702	Peroxiredoxin (alkyl hydroperoxide reductase subunit C).	Prolipoprotein diacylglyceryl transferase.	0.828
SDU83729.1	SDV11098.1	SAMN05216202_0333	SAMN05216202_5181	Peroxiredoxin (alkyl hydroperoxide reductase subunit C).	Cytochrome c biogenesis protein CcdA.	0.868
SDU83729.1	tpx	SAMN05216202_0333	SAMN05216202_1977	Peroxiredoxin (alkyl hydroperoxide reductase subunit C).	Thiol peroxidase (atypical 2-Cys peroxiredoxin); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.	0.523
SDU86654.1	SDU83729.1	SAMN05216202_0801	SAMN05216202_0333	Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.	Peroxiredoxin (alkyl hydroperoxide reductase subunit C).	0.827
SDU86654.1	SDU92417.1	SAMN05216202_0801	SAMN05216202_1697	Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.	Protein SCO1/2.	0.873
SDU86654.1	SDV08347.1	SAMN05216202_0801	SAMN05216202_4553	Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.	Protein SCO1/2.	0.874
SDU86654.1	SDV09916.1	SAMN05216202_0801	SAMN05216202_4910	Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.	1-Cys peroxiredoxin.	0.827
SDU86654.1	SDV11098.1	SAMN05216202_0801	SAMN05216202_5181	Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.	Cytochrome c biogenesis protein CcdA.	0.484
SDU92417.1	SDU86654.1	SAMN05216202_1697	SAMN05216202_0801	Protein SCO1/2.	Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.	0.873
SDU92417.1	SDU98643.1	SAMN05216202_1697	SAMN05216202_2702	Protein SCO1/2.	Prolipoprotein diacylglyceryl transferase.	0.911
SDU92417.1	SDV11098.1	SAMN05216202_1697	SAMN05216202_5181	Protein SCO1/2.	Cytochrome c biogenesis protein CcdA.	0.853
SDU98643.1	SDU83729.1	SAMN05216202_2702	SAMN05216202_0333	Prolipoprotein diacylglyceryl transferase.	Peroxiredoxin (alkyl hydroperoxide reductase subunit C).	0.828
SDU98643.1	SDU92417.1	SAMN05216202_2702	SAMN05216202_1697	Prolipoprotein diacylglyceryl transferase.	Protein SCO1/2.	0.911
SDU98643.1	SDV08347.1	SAMN05216202_2702	SAMN05216202_4553	Prolipoprotein diacylglyceryl transferase.	Protein SCO1/2.	0.891
SDU98643.1	SDV09916.1	SAMN05216202_2702	SAMN05216202_4910	Prolipoprotein diacylglyceryl transferase.	1-Cys peroxiredoxin.	0.828
SDU98643.1	SDV11098.1	SAMN05216202_2702	SAMN05216202_5181	Prolipoprotein diacylglyceryl transferase.	Cytochrome c biogenesis protein CcdA.	0.612
SDV08347.1	SDU86654.1	SAMN05216202_4553	SAMN05216202_0801	Protein SCO1/2.	Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.	0.874
SDV08347.1	SDU98643.1	SAMN05216202_4553	SAMN05216202_2702	Protein SCO1/2.	Prolipoprotein diacylglyceryl transferase.	0.891
SDV08347.1	SDV11098.1	SAMN05216202_4553	SAMN05216202_5181	Protein SCO1/2.	Cytochrome c biogenesis protein CcdA.	0.853