STRINGSTRING
CEG18_25640 CEG18_25640 CEG18_25635 CEG18_25635 CEG18_25625 CEG18_25625 CEG18_19070 CEG18_19070 livG livG livM livM CEG18_19085 CEG18_19085 CEG18_19090 CEG18_19090 CEG18_01870 CEG18_01870 CEG18_02885 CEG18_02885 CEG18_02895 CEG18_02895 CEG18_00075 CEG18_00075 CEG18_09745 CEG18_09745 metN metN CEG18_09710 CEG18_09710 metN-2 metN-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CEG18_25640Unannotated protein. (244 aa)
CEG18_25635Unannotated protein. (221 aa)
CEG18_25625Unannotated protein. (302 aa)
CEG18_19070Unannotated protein; Belongs to the ABC transporter superfamily. (233 aa)
livGUnannotated protein. (255 aa)
livMUnannotated protein; Belongs to the binding-protein-dependent transport system permease family. (418 aa)
CEG18_19085Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (307 aa)
CEG18_19090Unannotated protein. (373 aa)
CEG18_01870Unannotated protein. (299 aa)
CEG18_02885Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (304 aa)
CEG18_02895Unannotated protein. (291 aa)
CEG18_00075Unannotated protein. (221 aa)
CEG18_09745Unannotated protein. (214 aa)
metNUnannotated protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (353 aa)
CEG18_09710Unannotated protein. (222 aa)
metN-2Unannotated protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (336 aa)
Your Current Organism:
Pseudomonas nitroreducens
NCBI taxonomy Id: 46680
Other names: ATCC 33634, CCUG 12538, CIP 106747, DSM 14399, IFO 12694, JCM 2782, NBRC 12694, P. nitroreducens, Pseudomonas azelaica, strain P-6
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