(24 nodes) beta-Lactam resistance network (Lachnoanaerobaculum saburreum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KXB53832.1	Periplasmic oligopeptide-binding family protein; KEGG: esi:Exig_2057 2.5e-52 4-phytase; Psort location: Periplasmic, score: 10.00. (451 aa)
	KXB53977.1	Hypothetical protein; KEGG: esi:Exig_0500 2.2e-12 4-phytase K15580; Psort location: Periplasmic, score: 9.44. (123 aa)
	KXB53974.1	KEGG: pfe:PSF113_4138 2.9e-12 TetR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97. (205 aa)
	KXB55607.1	KEGG: pfe:PSF113_4138 0.0033 TetR family transcriptional regulator; Psort location: Cytoplasmic, score: 8.96. (198 aa)
	KXB55747.1	KEGG: efu:HMPREF0351_12109 0.0014 TetR/AcrR family transcriptional regulator; Psort location: Cytoplasmic, score: 8.96. (204 aa)
	KXB56140.1	Transcriptional regulator, TetR family; KEGG: dat:HRM2_17590 0.00071 ABC-type molybdate/tungstate transporter ATP binding protein (ATPase); Psort location: Cytoplasmic, score: 8.96. (202 aa)
	KXB56363.1	Hypothetical protein; KEGG: bpu:BPUM_3702 3.8e-17 ybbA; esterase. (234 aa)
	KXB57291.1	Transcriptional regulator, TetR family; KEGG: cnc:CNE_2c15950 0.0020 codA; cytosine deaminase; Psort location: Cytoplasmic, score: 8.96. (190 aa)
	KXB57780.1	ABC transporter, ATP-binding protein; KEGG: lan:Lacal_1101 6.2e-49 Fe(3+)-transporting ATPase K02031:K02032; Psort location: CytoplasmicMembrane, score: 9.98. (251 aa)
	KXB60070.1	Hypothetical protein; KEGG: pfr:PFREUD_10120 4.8e-42 exopolysaccharide biosynthesis protein; Psort location: OuterMembrane, score: 9.52. (341 aa)
	KXB60406.1	KEGG: bcq:BCQ_2815 1.7e-94 hypothetical protein; K14415 tRNA-splicing ligase RtcB; Psort location: Cytoplasmic, score: 9.97. (404 aa)
	KXB60535.1	Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (190 aa)
	KXB60824.1	Transporter, major facilitator family protein; KEGG: cfu:CFU_2187 9.2e-23 pyridoxal phosphate-dependent aminotransferase K00836; Psort location: CytoplasmicMembrane, score: 10.00. (408 aa)
	KXB60822.1	Transcriptional regulator, TetR family; KEGG: bcl:ABC2937 5.2e-06 NADH dehydrogenase K03885; Psort location: Cytoplasmic, score: 8.96. (201 aa)
	KXB61232.1	Hypothetical protein; KEGG: bpu:BPUM_3702 2.1e-18 ybbA; esterase. (216 aa)
	KXB61262.1	Transcriptional regulator, TetR family. (185 aa)
	KXB60784.1	Efflux transporter, RND family, MFP subunit; KEGG: ase:ACPL_5132 5.1e-05 cusB; DNA-directed RNA polymerase subunit beta'; Psort location: Extracellular, score: 9.64. (590 aa)
	KXB52846.1	Transglycosylase; KEGG: csh:Closa_1568 0. peptidoglycan glycosyltransferase K05366; Psort location: CytoplasmicMembrane, score: 9.82. (988 aa)
	KXB53503.1	Penicillin-binding protein, transpeptidase domain protein; KEGG: csc:Csac_1869 9.6e-81 peptidoglycan glycosyltransferase K05515; Psort location: CytoplasmicMembrane, score: 9.82. (957 aa)
	KXB53451.1	KEGG: bcq:BCQ_2815 2.1e-73 hypothetical protein; K14415 tRNA-splicing ligase RtcB; Psort location: Cytoplasmic, score: 9.97. (389 aa)
	KXB53699.1	ABC transporter, ATP-binding protein; KEGG: cle:Clole_1450 5.6e-103 peptide ABC transporter ATPase K10823; Psort location: CytoplasmicMembrane, score: 7.88. (350 aa)
	KXB53698.1	Periplasmic oligopeptide-binding family protein; KEGG: esi:Exig_2057 7.5e-53 4-phytase; Psort location: Periplasmic, score: 10.00. (436 aa)
	KXB53834.1	Hypothetical protein; KEGG: bcy:Bcer98_1935 2.1e-11 4-phytase K02035; Psort location: Periplasmic, score: 9.44. (106 aa)
	KXB53833.1	ABC transporter, substrate-binding protein, family 5; KEGG: esi:Exig_2057 1.8e-74 4-phytase; Psort location: Periplasmic, score: 10.00. (550 aa)

Your Current Organism:

Lachnoanaerobaculum saburreum

NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KXB52846.1	KXB53503.1	HMPREF1866_02764	HMPREF1866_02575	Transglycosylase; KEGG: csh:Closa_1568 0. peptidoglycan glycosyltransferase K05366; Psort location: CytoplasmicMembrane, score: 9.82.	Penicillin-binding protein, transpeptidase domain protein; KEGG: csc:Csac_1869 9.6e-81 peptidoglycan glycosyltransferase K05515; Psort location: CytoplasmicMembrane, score: 9.82.	0.955
KXB53503.1	KXB52846.1	HMPREF1866_02575	HMPREF1866_02764	Penicillin-binding protein, transpeptidase domain protein; KEGG: csc:Csac_1869 9.6e-81 peptidoglycan glycosyltransferase K05515; Psort location: CytoplasmicMembrane, score: 9.82.	Transglycosylase; KEGG: csh:Closa_1568 0. peptidoglycan glycosyltransferase K05366; Psort location: CytoplasmicMembrane, score: 9.82.	0.955
KXB53698.1	KXB53699.1	HMPREF1866_02495	HMPREF1866_02496	Periplasmic oligopeptide-binding family protein; KEGG: esi:Exig_2057 7.5e-53 4-phytase; Psort location: Periplasmic, score: 10.00.	ABC transporter, ATP-binding protein; KEGG: cle:Clole_1450 5.6e-103 peptide ABC transporter ATPase K10823; Psort location: CytoplasmicMembrane, score: 7.88.	0.969
KXB53698.1	KXB53832.1	HMPREF1866_02495	HMPREF1866_02492	Periplasmic oligopeptide-binding family protein; KEGG: esi:Exig_2057 7.5e-53 4-phytase; Psort location: Periplasmic, score: 10.00.	Periplasmic oligopeptide-binding family protein; KEGG: esi:Exig_2057 2.5e-52 4-phytase; Psort location: Periplasmic, score: 10.00.	0.926
KXB53698.1	KXB53833.1	HMPREF1866_02495	HMPREF1866_02493	Periplasmic oligopeptide-binding family protein; KEGG: esi:Exig_2057 7.5e-53 4-phytase; Psort location: Periplasmic, score: 10.00.	ABC transporter, substrate-binding protein, family 5; KEGG: esi:Exig_2057 1.8e-74 4-phytase; Psort location: Periplasmic, score: 10.00.	0.945
KXB53698.1	KXB53834.1	HMPREF1866_02495	HMPREF1866_02494	Periplasmic oligopeptide-binding family protein; KEGG: esi:Exig_2057 7.5e-53 4-phytase; Psort location: Periplasmic, score: 10.00.	Hypothetical protein; KEGG: bcy:Bcer98_1935 2.1e-11 4-phytase K02035; Psort location: Periplasmic, score: 9.44.	0.987
KXB53698.1	KXB53977.1	HMPREF1866_02495	HMPREF1866_02491	Periplasmic oligopeptide-binding family protein; KEGG: esi:Exig_2057 7.5e-53 4-phytase; Psort location: Periplasmic, score: 10.00.	Hypothetical protein; KEGG: esi:Exig_0500 2.2e-12 4-phytase K15580; Psort location: Periplasmic, score: 9.44.	0.980
KXB53698.1	KXB57780.1	HMPREF1866_02495	HMPREF1866_01288	Periplasmic oligopeptide-binding family protein; KEGG: esi:Exig_2057 7.5e-53 4-phytase; Psort location: Periplasmic, score: 10.00.	ABC transporter, ATP-binding protein; KEGG: lan:Lacal_1101 6.2e-49 Fe(3+)-transporting ATPase K02031:K02032; Psort location: CytoplasmicMembrane, score: 9.98.	0.625
KXB53699.1	KXB53698.1	HMPREF1866_02496	HMPREF1866_02495	ABC transporter, ATP-binding protein; KEGG: cle:Clole_1450 5.6e-103 peptide ABC transporter ATPase K10823; Psort location: CytoplasmicMembrane, score: 7.88.	Periplasmic oligopeptide-binding family protein; KEGG: esi:Exig_2057 7.5e-53 4-phytase; Psort location: Periplasmic, score: 10.00.	0.969
KXB53699.1	KXB53832.1	HMPREF1866_02496	HMPREF1866_02492	ABC transporter, ATP-binding protein; KEGG: cle:Clole_1450 5.6e-103 peptide ABC transporter ATPase K10823; Psort location: CytoplasmicMembrane, score: 7.88.	Periplasmic oligopeptide-binding family protein; KEGG: esi:Exig_2057 2.5e-52 4-phytase; Psort location: Periplasmic, score: 10.00.	0.935
KXB53699.1	KXB53833.1	HMPREF1866_02496	HMPREF1866_02493	ABC transporter, ATP-binding protein; KEGG: cle:Clole_1450 5.6e-103 peptide ABC transporter ATPase K10823; Psort location: CytoplasmicMembrane, score: 7.88.	ABC transporter, substrate-binding protein, family 5; KEGG: esi:Exig_2057 1.8e-74 4-phytase; Psort location: Periplasmic, score: 10.00.	0.952
KXB53699.1	KXB53834.1	HMPREF1866_02496	HMPREF1866_02494	ABC transporter, ATP-binding protein; KEGG: cle:Clole_1450 5.6e-103 peptide ABC transporter ATPase K10823; Psort location: CytoplasmicMembrane, score: 7.88.	Hypothetical protein; KEGG: bcy:Bcer98_1935 2.1e-11 4-phytase K02035; Psort location: Periplasmic, score: 9.44.	0.867
KXB53699.1	KXB53977.1	HMPREF1866_02496	HMPREF1866_02491	ABC transporter, ATP-binding protein; KEGG: cle:Clole_1450 5.6e-103 peptide ABC transporter ATPase K10823; Psort location: CytoplasmicMembrane, score: 7.88.	Hypothetical protein; KEGG: esi:Exig_0500 2.2e-12 4-phytase K15580; Psort location: Periplasmic, score: 9.44.	0.816
KXB53699.1	KXB57780.1	HMPREF1866_02496	HMPREF1866_01288	ABC transporter, ATP-binding protein; KEGG: cle:Clole_1450 5.6e-103 peptide ABC transporter ATPase K10823; Psort location: CytoplasmicMembrane, score: 7.88.	ABC transporter, ATP-binding protein; KEGG: lan:Lacal_1101 6.2e-49 Fe(3+)-transporting ATPase K02031:K02032; Psort location: CytoplasmicMembrane, score: 9.98.	0.812
KXB53832.1	KXB53698.1	HMPREF1866_02492	HMPREF1866_02495	Periplasmic oligopeptide-binding family protein; KEGG: esi:Exig_2057 2.5e-52 4-phytase; Psort location: Periplasmic, score: 10.00.	Periplasmic oligopeptide-binding family protein; KEGG: esi:Exig_2057 7.5e-53 4-phytase; Psort location: Periplasmic, score: 10.00.	0.926
KXB53832.1	KXB53699.1	HMPREF1866_02492	HMPREF1866_02496	Periplasmic oligopeptide-binding family protein; KEGG: esi:Exig_2057 2.5e-52 4-phytase; Psort location: Periplasmic, score: 10.00.	ABC transporter, ATP-binding protein; KEGG: cle:Clole_1450 5.6e-103 peptide ABC transporter ATPase K10823; Psort location: CytoplasmicMembrane, score: 7.88.	0.935
KXB53832.1	KXB53833.1	HMPREF1866_02492	HMPREF1866_02493	Periplasmic oligopeptide-binding family protein; KEGG: esi:Exig_2057 2.5e-52 4-phytase; Psort location: Periplasmic, score: 10.00.	ABC transporter, substrate-binding protein, family 5; KEGG: esi:Exig_2057 1.8e-74 4-phytase; Psort location: Periplasmic, score: 10.00.	0.940
KXB53832.1	KXB53834.1	HMPREF1866_02492	HMPREF1866_02494	Periplasmic oligopeptide-binding family protein; KEGG: esi:Exig_2057 2.5e-52 4-phytase; Psort location: Periplasmic, score: 10.00.	Hypothetical protein; KEGG: bcy:Bcer98_1935 2.1e-11 4-phytase K02035; Psort location: Periplasmic, score: 9.44.	0.981
KXB53832.1	KXB53977.1	HMPREF1866_02492	HMPREF1866_02491	Periplasmic oligopeptide-binding family protein; KEGG: esi:Exig_2057 2.5e-52 4-phytase; Psort location: Periplasmic, score: 10.00.	Hypothetical protein; KEGG: esi:Exig_0500 2.2e-12 4-phytase K15580; Psort location: Periplasmic, score: 9.44.	0.988
KXB53832.1	KXB57780.1	HMPREF1866_02492	HMPREF1866_01288	Periplasmic oligopeptide-binding family protein; KEGG: esi:Exig_2057 2.5e-52 4-phytase; Psort location: Periplasmic, score: 10.00.	ABC transporter, ATP-binding protein; KEGG: lan:Lacal_1101 6.2e-49 Fe(3+)-transporting ATPase K02031:K02032; Psort location: CytoplasmicMembrane, score: 9.98.	0.576

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