STRINGSTRING
SGO_0383 SGO_0383 SGO_0384 SGO_0384 SGO_0439 SGO_0439 SGO_0440 SGO_0440 SGO_0441 SGO_0441 SGO_0630 SGO_0630 SGO_0631 SGO_0631 glpK glpK SGO_0633 SGO_0633 hup hup SGO_0702 SGO_0702 budA budA butA butA bta bta
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SGO_0383Proton/sodium- glutamate symport protein; Identified by match to protein family HMM PF00375; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (416 aa)
SGO_0384Putative carboxylate-amine/thiol ligase. (312 aa)
SGO_0439Conserved hypothetical protein. (97 aa)
SGO_0440L-iditol 2-dehydrogenase BH3949; Identified by match to protein family HMM PF00107; match to protein family HMM PF08240. (348 aa)
SGO_0441Identified by match to protein family HMM PF00892. (303 aa)
SGO_0630Glycerol uptake facilitator protein; Identified by match to protein family HMM PF00230; match to protein family HMM TIGR00861; Belongs to the MIP/aquaporin (TC 1.A.8) family. (234 aa)
SGO_0631Alpha-glycerophosphate oxidase; Identified by match to protein family HMM PF01266. (608 aa)
glpKGlycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. (502 aa)
SGO_0633Conserved hypothetical protein; Identified by match to protein family HMM PF05043. (475 aa)
hupDNA-binding histone-like protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (91 aa)
SGO_0702Conserved hypothetical protein. (78 aa)
budAAlpha-acetolactate decarboxylase; Identified by match to protein family HMM PF03306; match to protein family HMM TIGR01252; Belongs to the alpha-acetolactate decarboxylase family. (239 aa)
butAAcetoin dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF03446; match to protein family HMM PF08659; match to protein family HMM TIGR02415. (254 aa)
btaPossible bacteriocin transport accessory protein; Identified by match to protein family HMM TIGR01295. (115 aa)
Your Current Organism:
Streptococcus gordonii
NCBI taxonomy Id: 467705
Other names: S. gordonii str. Challis substr. CH1, Streptococcus gordonii ATCC 35105, Streptococcus gordonii str. Challis substr. CH1, Streptococcus gordonii str. Challis substr. DL1, Streptococcus gordonii str. Challis substr. V288
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