STRINGSTRING
Cwoe_1804 Cwoe_1804 Cwoe_1805 Cwoe_1805 recB recB Cwoe_3589 Cwoe_3589 Cwoe_5824 Cwoe_5824
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cwoe_1804KEGG: acp:A2cp1_1438 ATP-dependent nuclease subunit B-like protein. (986 aa)
Cwoe_1805PFAM: UvrD/REP helicase; KEGG: acp:A2cp1_1439 UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. (1184 aa)
recBExodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...] (1132 aa)
Cwoe_3589PFAM: UvrD/REP helicase; KEGG: gme:Gmet_0089 ATP-dependent DNA helicase PcrA. (746 aa)
Cwoe_5824PFAM: UvrD/REP helicase; KEGG: ank:AnaeK_0104 UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. (1052 aa)
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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