(22 nodes) Mixed, incl. Sensory perception of sound, and Interaction between L1 and Ankyrins network (Trachymyrmex cornetzi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC57_16894	Myosin-XV; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (4056 aa)
	ALC57_16819	Transmembrane channel-like protein 3. (1120 aa)
	ALC57_10537	Protein singed. (549 aa)
	ALC57_09913	Spectrin alpha chain. (2433 aa)
	ALC57_09473	Uncharacterized protein. (776 aa)
	ALC57_07634	Epidermal growth factor receptor kinase substrate 8. (889 aa)
	ALC57_06580	Whirlin. (271 aa)
	ALC57_06192	Harmonin. (930 aa)
	ALC57_05922	Ankyrin-2. (6882 aa)
	ALC57_02044	Poly [ADP-ribose] polymerase. (1211 aa)
	ALC57_17490	Myosin-I heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2215 aa)
	ALC57_17262	MAGUK p55 subfamily member 2; Belongs to the MAGUK family. (583 aa)
	ALC57_13531	Calcium and integrin-binding protein 1. (178 aa)
	ALC57_12630	Spectrin beta chain; Belongs to the spectrin family. (2400 aa)
	ALC57_11109	Myosin-VIIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2211 aa)
	ALC57_10357	Ankyrin-2. (1526 aa)
	ALC57_10353	Uncharacterized protein. (2436 aa)
	ALC57_09187	Spectrin beta chain, brain 4. (4029 aa)
	ALC57_07977	Uncharacterized protein. (785 aa)
	ALC57_07494	Uncharacterized protein. (353 aa)
	ALC57_02368	Usher syndrome type-1G protein like protein. (1104 aa)
	ALC57_01306	Protein outspread. (210 aa)

Your Current Organism:

Trachymyrmex cornetzi

NCBI taxonomy Id: 471704
Other names: T. cornetzi

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC57_01306	ALC57_07977	A0A195EMS0	A0A195E345	Protein outspread.	Uncharacterized protein.	0.650
ALC57_01306	ALC57_09187	A0A195EMS0	A0A195E0P1	Protein outspread.	Spectrin beta chain, brain 4.	0.558
ALC57_01306	ALC57_09473	A0A195EMS0	A0A151J5D3	Protein outspread.	Uncharacterized protein.	0.463
ALC57_01306	ALC57_09913	A0A195EMS0	A0A151J4T0	Protein outspread.	Spectrin alpha chain.	0.698
ALC57_01306	ALC57_12630	A0A195EMS0	A0A195DQE2	Protein outspread.	Spectrin beta chain; Belongs to the spectrin family.	0.558
ALC57_02044	ALC57_06192	A0A151JP23	A0A151J8V1	Poly [ADP-ribose] polymerase.	Harmonin.	0.400
ALC57_02044	ALC57_07494	A0A151JP23	A0A195E5S8	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.989
ALC57_02044	ALC57_09187	A0A151JP23	A0A195E0P1	Poly [ADP-ribose] polymerase.	Spectrin beta chain, brain 4.	0.904
ALC57_02044	ALC57_09913	A0A151JP23	A0A151J4T0	Poly [ADP-ribose] polymerase.	Spectrin alpha chain.	0.733
ALC57_02044	ALC57_12630	A0A151JP23	A0A195DQE2	Poly [ADP-ribose] polymerase.	Spectrin beta chain; Belongs to the spectrin family.	0.904
ALC57_02368	ALC57_06192	A0A195EK62	A0A151J8V1	Usher syndrome type-1G protein like protein.	Harmonin.	0.986
ALC57_02368	ALC57_06580	A0A195EK62	A0A151J8A0	Usher syndrome type-1G protein like protein.	Whirlin.	0.688
ALC57_02368	ALC57_07494	A0A195EK62	A0A195E5S8	Usher syndrome type-1G protein like protein.	Uncharacterized protein.	0.463
ALC57_02368	ALC57_07634	A0A195EK62	A0A151J7Y8	Usher syndrome type-1G protein like protein.	Epidermal growth factor receptor kinase substrate 8.	0.421
ALC57_02368	ALC57_09187	A0A195EK62	A0A195E0P1	Usher syndrome type-1G protein like protein.	Spectrin beta chain, brain 4.	0.421
ALC57_02368	ALC57_11109	A0A195EK62	A0A195DUL7	Usher syndrome type-1G protein like protein.	Myosin-VIIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.966
ALC57_02368	ALC57_12630	A0A195EK62	A0A195DQE2	Usher syndrome type-1G protein like protein.	Spectrin beta chain; Belongs to the spectrin family.	0.421
ALC57_02368	ALC57_13531	A0A195EK62	A0A195DPF2	Usher syndrome type-1G protein like protein.	Calcium and integrin-binding protein 1.	0.574
ALC57_02368	ALC57_16819	A0A195EK62	A0A151IUF0	Usher syndrome type-1G protein like protein.	Transmembrane channel-like protein 3.	0.536
ALC57_02368	ALC57_16894	A0A195EK62	A0A151IUA1	Usher syndrome type-1G protein like protein.	Myosin-XV; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.966