(78 nodes) Mixed, incl. SAGA-type complex, and Collagen formation network (Trachymyrmex cornetzi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC57_18547	Integrin alpha-PS1; Belongs to the integrin alpha chain family. (1063 aa)
	ALC57_18023	Uncharacterized protein. (92 aa)
	ALC57_18020	Nuclear receptor corepressor 1. (2252 aa)
	ALC57_17897	Collagen alpha-2(IV) chain. (1371 aa)
	ALC57_16876	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (568 aa)
	ALC57_16651	Uncharacterized protein. (2974 aa)
	ALC57_16578	Uncharacterized protein. (86 aa)
	ALC57_16085	Transcription initiation protein SPT3 like protein. (295 aa)
	ALC57_15752	Uncharacterized protein. (690 aa)
	ALC57_15540	Laminin subunit alpha-1. (3192 aa)
	ALC57_13776	Uncharacterized protein. (345 aa)
	ALC57_12046	Uncharacterized protein. (1296 aa)
	ALC57_12063	Multiple epidermal growth factor-like domains protein 10. (529 aa)
	ALC57_11405	Transcriptional adapter 2-alpha. (614 aa)
	ALC57_11189	Plectin. (197 aa)
	ALC57_11186	Dystonin. (7356 aa)
	ALC57_09888	Tetraspanin. (253 aa)
	ALC57_09563	Integrin beta; Belongs to the integrin beta chain family. (890 aa)
	ALC57_09117	SUN domain-containing protein 1. (943 aa)
	ALC57_08886	Collagen alpha-2(IV) chain. (499 aa)
	ALC57_08621	Uncharacterized protein. (137 aa)
	ALC57_08175	Uncharacterized protein. (81 aa)
	ALC57_07934	KASH domain-containing protein. (1621 aa)
	ALC57_07624	Ataxin-7-like protein 2. (620 aa)
	ALC57_07625	Translation initiation factor IF-2. (258 aa)
	ALC57_06209	Uncharacterized protein. (260 aa)
	ALC57_05277	Transcriptional adapter 1. (318 aa)
	ALC57_05055	Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. (3757 aa)
	ALC57_04101	Cat eye syndrome critical region protein 2. (2157 aa)
	ALC57_02737	Glycosyltransferase 25 family member. (568 aa)
	ALC57_01116	Metalloendopeptidase. (1223 aa)
	ALC57_00652	Uncharacterized protein. (434 aa)
	ALC57_18826	Integrin beta; Belongs to the integrin beta chain family. (824 aa)
	ALC57_18651	Carboxypeptidase B. (2181 aa)
	ALC57_18177	TM2 domain-containing protein almondex. (234 aa)
	ALC57_17493	F-box-like/WD repeat-containing protein TBL1XR1. (503 aa)
	ALC57_17510	Uncharacterized protein. (277 aa)
	ALC57_17515	Uncharacterized protein. (92 aa)
	ALC57_17206	Histone acetyltransferase KAT2A. (806 aa)
	ALC57_17207	Histone acetyltransferase KAT2A. (865 aa)
	ALC57_17351	Uncharacterized protein. (256 aa)
	ALC57_13635	Transcriptional adapter 2B. (437 aa)
	ALC57_13572	Collagen alpha-1(XV) chain. (883 aa)
	ALC57_13578	Collagen alpha-1(XV) chain. (249 aa)
	ALC57_13079	Integrin alpha-PS2; Belongs to the integrin alpha chain family. (1655 aa)
	ALC57_12635	Uncharacterized protein. (981 aa)
	ALC57_12487	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (155 aa)
	ALC57_12441	SH3 domain-containing RING finger protein 3. (910 aa)
	ALC57_12711	Transcriptional adapter 3-B. (446 aa)
	ALC57_12488	Uncharacterized protein. (79 aa)
	ALC57_11854	Accumulation-associated protein. (243 aa)
	ALC57_11856	Collagen alpha-1(IV) chain. (2124 aa)
	ALC57_11852	Collagen alpha-1(IV) chain. (2069 aa)
	ALC57_11460	Follistatin-like domain-containing protein. (371 aa)
	ALC57_11092	Ubiquitin carboxyl-terminal hydrolase. (501 aa)
	ALC57_10347	Collagen alpha-2(I) chain. (3009 aa)
	ALC57_10104	Uncharacterized protein. (1799 aa)
	ALC57_09439	Ubiquitin carboxyl-terminal hydrolase 30; Belongs to the peptidase C19 family. (475 aa)
	ALC57_09179	GAS2-like protein 1. (974 aa)
	ALC57_08674	STAGA complex 65 subunit gamma. (303 aa)
	ALC57_08377	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3. (771 aa)
	ALC57_08453	RRM domain-containing protein. (1112 aa)
	ALC57_07665	Integrin alpha-PS4; Belongs to the integrin alpha chain family. (1066 aa)
	ALC57_07035	CD63 antigen; Belongs to the tetraspanin (TM4SF) family. (282 aa)
	ALC57_07078	Growth arrest-specific protein 2. (456 aa)
	ALC57_06866	Uncharacterized protein C16orf52 like protein A. (167 aa)
	ALC57_06296	Protein FAM48A. (1102 aa)
	ALC57_04793	Transport and Golgi organization protein 1. (1466 aa)
	ALC57_04893	Uncharacterized protein. (120 aa)
	ALC57_04715	Collagen alpha-1(IX) chain. (899 aa)
	ALC57_04261	Transducin beta-like protein 2. (348 aa)
	ALC57_03825	Integrin alpha-9; Belongs to the integrin alpha chain family. (1046 aa)
	Sgf11	SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. (344 aa)
	ALC57_02792	TAF domain-containing protein. (518 aa)
	ALC57_02503	SAGA-associated factor 29 like protein. (293 aa)
	ALC57_02300	SUN domain-containing protein 2. (317 aa)
	ALC57_01937	Tetraspanin. (241 aa)
	ALC57_00873	Ubiquitin carboxyl-terminal hydrolase. (552 aa)

Your Current Organism:

Trachymyrmex cornetzi

NCBI taxonomy Id: 471704
Other names: T. cornetzi

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC57_00652	ALC57_00873	A0A151JRP5	A0A195EN71	Uncharacterized protein.	Ubiquitin carboxyl-terminal hydrolase.	0.463
ALC57_00652	ALC57_02503	A0A151JRP5	A0A195EJH7	Uncharacterized protein.	SAGA-associated factor 29 like protein.	0.583
ALC57_00652	ALC57_02792	A0A151JRP5	A0A195EHI0	Uncharacterized protein.	TAF domain-containing protein.	0.605
ALC57_00652	ALC57_04101	A0A151JRP5	A0A151JCI6	Uncharacterized protein.	Cat eye syndrome critical region protein 2.	0.553
ALC57_00652	ALC57_04261	A0A151JRP5	A0A195EF07	Uncharacterized protein.	Transducin beta-like protein 2.	0.443
ALC57_00652	ALC57_05055	A0A151JRP5	A0A151JC16	Uncharacterized protein.	Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.	0.768
ALC57_00652	ALC57_05277	A0A151JRP5	A0A151JB33	Uncharacterized protein.	Transcriptional adapter 1.	0.706
ALC57_00652	ALC57_06209	A0A151JRP5	A0A151J910	Uncharacterized protein.	Uncharacterized protein.	0.458
ALC57_00652	ALC57_07078	A0A151JRP5	A0A195E6W7	Uncharacterized protein.	Growth arrest-specific protein 2.	0.458
ALC57_00652	ALC57_07624	A0A151JRP5	A0A151J7X9	Uncharacterized protein.	Ataxin-7-like protein 2.	0.767
ALC57_00652	ALC57_07934	A0A151JRP5	A0A151J7A1	Uncharacterized protein.	KASH domain-containing protein.	0.458
ALC57_00652	ALC57_08377	A0A151JRP5	A0A195E225	Uncharacterized protein.	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.	0.428
ALC57_00652	ALC57_08621	A0A151JRP5	A0A151J6R0	Uncharacterized protein.	Uncharacterized protein.	0.538
ALC57_00652	ALC57_08674	A0A151JRP5	A0A195E1M8	Uncharacterized protein.	STAGA complex 65 subunit gamma.	0.525
ALC57_00652	ALC57_09179	A0A151JRP5	A0A195E0U2	Uncharacterized protein.	GAS2-like protein 1.	0.458
ALC57_00652	ALC57_09439	A0A151JRP5	A0A195E058	Uncharacterized protein.	Ubiquitin carboxyl-terminal hydrolase 30; Belongs to the peptidase C19 family.	0.463
ALC57_00652	ALC57_09563	A0A151JRP5	A0A151J572	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.462
ALC57_00652	ALC57_11092	A0A151JRP5	A0A195DUN1	Uncharacterized protein.	Ubiquitin carboxyl-terminal hydrolase.	0.463
ALC57_00652	ALC57_11186	A0A151JRP5	A0A151J318	Uncharacterized protein.	Dystonin.	0.458
ALC57_00652	ALC57_11189	A0A151JRP5	A0A151J2V3	Uncharacterized protein.	Plectin.	0.458